Bosea sp. RAC05: BSY19_5322
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Entry
BSY19_5322 CDS
T04462
Name
(GenBank) RNA-metabolising metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bos
Bosea sp. RAC05
Pathway
bos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSY19_5322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bos03019
]
BSY19_5322
Messenger RNA biogenesis [BR:
bos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BSY19_5322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Lactamase_B_6
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AOG02892
LinkDB
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Position
pBSY19_1:584220..585902
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AA seq
560 aa
AA seq
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MVSCESHTIKGLEPSRATTDNESPCLVHKPTLKLPVHNAAPIPVPDADSILVVPLGGTDR
VGMNFTAYGTNGRWVLVDMGATFPGADDDQAADFAEAHEAEVDQIIPDPRSFQDILRRLD
AIVLTHAHEDHIGAIAPLLAFSAAWPKLATVPIYGTPYTLGIVKNKLREIGRSHPLRTMF
PKRTSRIGPFEITPIRVTHSAPETMALSIAARPGRIVHASDFKLDEDPVLGGRTDYTSLQ
RIGDHGVLAFMGDSTNAHLEGKARTEGEVMAGLTSIMQQHKGRVVVSTFASNLARIEGIR
LAAKRSGRLLASSGLSIARNIENAKATGVINPTLTPFLDGRRLPRDIAPDRLAMVCTGTQ
AEERSALRRMADDLEMGRRTPHGAMRLEEGDMVIHSARAIPGNEATIGAMFDVLRSHGVV
VIDAESGLPVHASGHGRRGDLADMYRMLQPRFALPVHGTRALVGAHADLAASMKGVEAVA
TPSEGEILRIDRAGITRVGRMEISLVAVMRGIGSNAGKEKLAPWPTGREPALVRNVEPFR
RPRPLAPRREIAPVAPAPGM
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
ttggtttcgtgtgaatcgcatacgatcaaaggactggagccctctagggccacaaccgac
aacgaaagtccttgcctagtgcacaagcccactctgaagctgcccgttcacaacgcagcc
cccatccccgttcctgacgccgattcaatcctggtcgttccactcggcggaaccgatcgg
gtcggaatgaacttcacggcctacgggaccaacggtcgttgggtactcgtcgacatgggg
gcgacctttcccggcgccgatgatgatcaggcggccgatttcgctgaagcccatgaagcc
gaggttgaccagatcatcccggatccgcgcagcttccaggacatcctgcgccgcctcgat
gccatcgtgctgacccacgcgcatgaggaccatatcggggccatcgcgcctctgctggcc
ttttcggccgcctggcccaagctggctaccgttccaatctacggcacgccctacacactg
ggcatcgtcaagaacaagctgcgtgagatcgggcgttcgcatccgctgcggaccatgttc
cccaagcgcacctcccgcatcgggcccttcgagatcacgcccattcgggtcacccattcg
gcgcccgagaccatggctctgtcgattgccgcccggcctggccgcatcgtccacgccagc
gacttcaagctcgacgaagatcccgttctcggcggccgcacggattacacctcgctccag
cgcatcggcgaccatggcgtcctggctttcatgggcgactcgaccaatgcccacctcgaa
gggaaggcccgtacggaaggcgaggtcatggccgggctgacctcgatcatgcagcagcac
aaggggcgcgtcgtcgtctcgacattcgcttccaacctggcgcgcatcgaggggatccgg
ctcgcggccaagcggtcggggcgtcttctggcgtcgtcgggcctgtcgattgcgcgcaac
atcgagaatgcaaaggcgaccggcgtaatcaaccctacgctgacacccttcctcgacggt
cggcgcctgccacgagacatcgctcctgaccggctggcgatggtgtgcactggcacacag
gccgaagaacgctcggcactgcgtcggatggcggatgatctcgaaatgggtcgtcgcacc
cctcatggcgccatgcgcctcgaggagggtgacatggtgattcactcggcccgcgcgatt
ccaggcaacgaggccaccatcggtgccatgttcgatgtgctgcgttcacatggcgtggtg
gtgatcgatgcggaatcagggcttcccgtccatgcatctggccacggccggcgcggggat
ctcgcggacatgtaccgcatgctccagccccgcttcgccctccccgttcacggcacgcgg
gcccttgtcggcgcccatgccgacctggccgcatcgatgaagggtgtcgaggccgtcgcg
acgccgtcggagggcgagatccttcgcatcgatcgcgccggcatcacacgtgtcgggcgg
atggagatctccctcgtcgccgtgatgcgcggcatcggctccaatgccggcaaggaaaag
cttgcgccctggcccacggggcgagagcctgcgctggtcaggaatgtcgagcccttccgc
cgaccgagaccgctcgccccgcgccgggaaatcgcgccggttgcccctgccccaggcatg
tag
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