Bosea sp. 685: RMR04_09030
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Entry
RMR04_09030 CDS
T10282
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bose Bosea sp. 685
Pathway
bose03420
Nucleotide excision repair
bose03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bose00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RMR04_09030
03430 Mismatch repair
RMR04_09030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bose03400
]
RMR04_09030
Enzymes [BR:
bose01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RMR04_09030
DNA repair and recombination proteins [BR:
bose03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RMR04_09030
MMR (mismatch excision repair)
Other MMR factors
RMR04_09030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
DUF3553
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
WNJ92419
UniProt:
A0AA96CD04
LinkDB
All DBs
Position
complement(1636539..1638923)
Genome browser
AA seq
794 aa
AA seq
DB search
MSDHNATSAPLPRPGGLASRAAAAPAAGYLAGLNPEQRLAVEATDGPVLVLAGAGTGKTR
VLTTRIAHLIATNRAYPSQILSVTFTNKAAREMKERIAHLVGPVAEGMPWLGTFHSISAK
LLRRHAELLGLRSDFTILDTDDQIRLMKQVIAAADIDEKRWPGRMLAGFIDSWKNRGLAP
KDVPPGEAAVFANGKGGALYLAYQERLKTLNAVDFGDLLLHCLTLFRDNPDVLATYHERF
RYILVDEYQDTNTAQYLWLRLLAQGRRNIACVGDDDQSIYGWRGAEVDNILRFEHDFPGA
TVVRLERNYRSTGHILATASKLIARNEGRLGKTLRTEDVEGEKVTITGAWDSQEEARLIG
DEIESLQRNGHNLSEIAILVRISAQMREIEDRFVHLGLPYRVIGGPRFYERAEIRDAMAY
LRCVVSPTDDLAFERIVNVPKRGLGDATIQILHNHARASQVSLLQSARMVVESDELKPKA
RTALRELVEAFGRWSARAEHMPQGELAELVLEESGYTEMWQKDRSADAAGRLENLKELVR
SLDEFPDLPAFLEHVSLVMDADSGETAERVSIMTLHGAKGLEFDTVFLPGWEEGLFPNQR
ALDESGRAGLEEERRLAHVGLTRARKRLKLYFASNRRIHGLWQSSLPSRFIDELPEEHVE
VVQAASNYSQGGYGASRFDRMESFGSSYNTPGWQRAQENKAKAGSGSGSGFSDSGGRGFG
SGGFGGGRQRGPMLIEGELTAKSTGTSAYDAGARVFHVKFGPGSVASVDGNKLTVDFDKA
GRKMVLDSFVQKAG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgaccacaacgccacctccgcccctttgccccgccccggcggcttggcctcacgc
gccgcggctgcgcctgcggccggctatctcgctggcctcaacccggagcagcgcctcgcc
gtcgaggcgacggacggccccgtgctcgtgctggccggcgccggcaccggcaagacgcgc
gtgctgaccacccgcatcgcccatctcatcgcgaccaaccgtgcctacccctcgcaaatc
ctgtcggtgaccttcaccaacaaggcggcgcgcgagatgaaggagcgcatcgcccatctc
gtcggcccggtcgccgagggcatgccgtggctgggcaccttccactcgatctcggccaag
ctgctgcgccgccatgccgaactgctcggcctgcgctcggatttcaccatcctcgacacc
gatgaccagatccgcctgatgaagcaggtgatcgccgccgccgatatcgatgagaagcgc
tggcccggccgcatgctggcgggcttcatcgatagctggaagaaccgtggcctcgccccc
aaggacgtcccgcccggcgaggccgccgtcttcgccaatggcaagggcggcgcgctctac
ctcgcttatcaggagcgcttgaagacgctgaacgccgtcgatttcggcgacctcttgctg
cactgcctaacgctgtttcgcgacaatcccgacgtgctcgcaacctatcacgagcgcttc
cgctacatcctggtcgacgagtatcaggacaccaacacggcccagtatctttggctgcgc
ctgctcgcccagggccggcgcaacatcgcctgcgtcggcgacgacgaccagtcgatctat
ggctggcgcggcgccgaggtcgacaacattctgcgcttcgagcacgattttcccggtgcg
accgtggtccggctggagcgcaattaccgctcgaccgggcatattctcgccaccgcctca
aaactaatcgcccgcaatgagggccggctcggcaagacgctgcgtaccgaggatgtcgag
ggcgagaaggtcaccatcaccggcgcctgggacagccaggaagaggccaggctgatcggc
gacgagatcgagagcctgcagcgcaacggccataacctctccgagatcgcgatcctggta
cgcatctcggcgcagatgcgcgagatcgaggatcgtttcgtccatctcggcctgccctat
cgcgtcatcggcggcccgcgcttctatgagcgcgccgaaatccgcgacgccatggcctat
ctgcgctgcgtcgtctcgccaaccgacgacctcgccttcgagcgcatcgtcaatgtgccc
aagcgcgggctcggcgacgccaccatccagatcctgcacaaccacgcccgcgcatcccag
gtctcgctgctgcaatcggcccgcatggtggtcgagagcgacgagttgaagcccaaggcc
agaaccgccttgcgcgaactggtcgaggccttcggccgttggtcggccagggccgagcac
atgccgcaaggcgagctcgccgagctcgtgctggaagagtcgggctataccgagatgtgg
cagaaggaccgctcggccgatgccgccggccggctcgaaaacctcaaggagctcgtccgc
tcgctcgacgaattccccgacctgccggccttcctcgagcatgtctcgctggtgatggac
gctgattccggcgaaaccgccgagcgcgtctcgatcatgaccctgcacggcgccaagggg
ttggagttcgacaccgtcttcctgcccggctgggaggaagggctcttccccaatcagcgc
gcgcttgacgagagcggtcgcgccggcctggaggaggagcgccgcctcgcccatgtcggc
ctgacccgggcccgcaagcggctcaagctctattttgcctcgaaccgccgcatccacggc
ctctggcaatcgagcctgcccagccgcttcatcgacgaattgccggaagagcatgtcgag
gtcgtccaggccgcctccaattacagccagggcggctatggcgcctcgcgcttcgaccgc
atggagagcttcggctccagctacaacacgccgggctggcagcgcgcccaggaaaacaag
gccaaggccggctcaggcagcggctcgggcttctccgacagcggcggacgcggcttcggc
tcgggcggtttcggcggcggccggcagcgcggcccgatgctgatcgaaggcgagctcacc
gccaaatcgaccggcacatcggcctatgacgccggcgcccgcgtcttccacgtcaaattc
ggccccggctccgtcgccagcgtcgacggcaacaagctgaccgtcgatttcgacaaggct
gggcggaagatggtgctggatagtttcgtgcagaaggcggggtga
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