Bosea sp. 685: RMR04_10330
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Entry
RMR04_10330 CDS
T10282
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bose Bosea sp. 685
Brite
KEGG Orthology (KO) [BR:
bose00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bose03032
]
RMR04_10330
03400 DNA repair and recombination proteins [BR:
bose03400
]
RMR04_10330
Enzymes [BR:
bose01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RMR04_10330
DNA replication proteins [BR:
bose03032
]
Prokaryotic type
DNA Topoisomerases
RMR04_10330
DNA repair and recombination proteins [BR:
bose03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RMR04_10330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
WNJ92662
UniProt:
A0AA95ZL93
LinkDB
All DBs
Position
1908064..1909074
Genome browser
AA seq
336 aa
AA seq
DB search
MSDGNGLARIRLKRVRGEDLTIQRHPRGRGFSYLDENGNTIRDTRTLARIRSLAVPPAYR
DVRIAADPCAHLQALGRDEAGRIQHRYHPQWDRVRERRKLKRLHALIGALPGLRAAVARD
MGSVTLNRDKALACAVAIMDRGHIRVGHEVYAEANGSYGASTLLKRHVELCGGRVELSFR
GKGGKAIACAFADARLARALQRLLRLPGRRLLQYCGEGGASVPIRADEINTYLRQITGMP
ISSKDLRMLAGNAAAAELLLAADIEVSKAGRKRQLAHIMRDIAERLTNTPAVVRKSYVHE
LVVRSFANGRLKASYEKSRASSGCSRIERALARLTA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgggaacggtctggcgaggattcgcctgaagcgggtgcgcggcgaggacttg
acgattcagcgtcatccccgagggcgagggttttcctatctagacgagaacggcaatacg
atccgcgacacgcggacgctcgcgcgcatccgctcgcttgccgttcccccggcctatcgc
gacgtccgcatcgcggctgatccatgcgcccatttgcaagcgctcggccgggacgaggcc
gggcgcatccagcaccgctatcatccacaatgggacagggtgcgcgagcgtcgcaagctc
aagcggctgcacgccctcatcggggcgctgccggggttgagggccgctgttgcgcgtgac
atgggctcggtgacgctcaaccgggacaaggcgctggcttgcgccgttgcgatcatggat
cgcggccatattcgcgtcgggcacgaagtctatgccgaggcgaatgggagctatggagcg
tcgacattgctcaagcgccacgtcgagctgtgcggcgggcgggtcgagctctcgttccgg
ggcaaaggtggcaaggcgatcgcatgcgccttcgcggatgcgcgcctggcccgcgcgctc
caacgcctgctgagattacccgggcgccgtttgctgcaatactgcggtgaaggcggcgcg
agcgttcccataagggccgacgagatcaacacctatcttcgccagatcacggggatgccg
atcagcagcaaggatttgcgcatgttggccggtaatgcggcggcggccgaactgttgctc
gcggccgatatcgaagtctccaaggccggtaggaagcgtcagctcgcccatatcatgcgc
gatatcgcggaacgcttgacgaacaccccggccgtggtccgcaagagctatgttcacgag
ttggtggtccgctcctttgccaatggccggctcaaggcatcctacgagaaaagccgggcg
agttccggctgttcccgcatagaacgggcgctcgcgcgcctcacggcgtag
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