Bosea sp. 685: RMR04_11035
Help
Entry
RMR04_11035 CDS
T10282
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bose Bosea sp. 685
Pathway
bose03020
RNA polymerase
Brite
Enzymes [BR:
bose01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RMR04_11035 (rpoC)
Transcription machinery [BR:
bose03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RMR04_11035 (rpoC)
DNA repair and recombination proteins [BR:
bose03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RMR04_11035 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNJ92790
UniProt:
A0AA96CAX9
LinkDB
All DBs
Position
2045945..2050162
Genome browser
AA seq
1405 aa
AA seq
DB search
MKQEVMNLFGQQPVQQAFDAIKISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKFKGVICEKCGVEVTLARVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLMDMPLKDLERILYFESYVVIEPGLTPLKDRQILSEEEYVRCQEEYGADTFTA
MIGAEAIREMLRALDLDQINADLKHEIATTTSELKPKKLMKRLKIIEAFQQSGNKPEWMV
MTIIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PEMKLHQCGLPKKMALELFKPFIYARLDAKGYSTTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGLPIIVPSQDIVLGLYYLSIVSDGEPGQGKIFGDFGELEYALH
EKVVTLHSKIKYRWTGVNQDGKSYTKIYDTTPGRVILSTALPKHPNMTFDVSNRLMTKKE
ISGMIDAVYRGCGQKESVIFCDRIMSLGFTHAFKAGISFGKDDMVVPENKWEIVDTTRAL
AKDYEQQYQDGLITQGEKYNKVVDAWAKCSDKLAQEMMARISTVKKDENGRDKPINSIYM
MSHSGARGSPAQMKQLAAMRGLMAKPSGEIIESPIISNFKEGLDVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDAIISEVDCGSESGIKMRAIIDAGQVVASLGIRILGRSA
AEDVTDIDGKVLVPKGTMIDEHHIEAINAAGVQEVKIRSVLTCATKNGVCATCYGRDLAR
GTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAATIADQSFVESNFEGVVKIRNRNLA
RNSDGDLIAMARNIAVVIVGPDGAERAVHRVQFGSKLRIDEGDKVKRGQRLIEWDPYSRP
ILAEVDGSVGFEDLVDGMSITETTDEATGINKRVVIDWRGSARTSDLRPALTVHGPDGKI
AKLARGGEARYILPVDGIISVEPGSHIKAGDVLARVSTDSAKTRDITGGLPRVAELFEAR
RPKDAAIIAEKAGVIGFGKDYKNKRRVTLTPHDGSEGLEYLIPKGKHIHLQDGDVVETGD
YILDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVGINDKHIEVIVRQMLQKIEITE
SGDTDILTGDQVDRIELQEINAKMKEEGKKPASGVPVLLGITKASLQTRSFISAASFQET
TRVLTEAAVNGKYDTLEGLKENVIVGSLIPAGTGAQVARIKQVATRRDDLIVGQKADAAA
KAAASAAKAAAATAAAVAAALPAAE
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagaggtcatgaaccttttcggccagcagccggtgcagcaggccttcgacgcg
atcaagatctcgatcgcgagcccggagaagatcctgtcctggtcctatggcgagatcaaa
aagccggagaccatcaactaccggaccttcaagcccgagcgcgacggcctgttctgcgcc
cgcatcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaag
ttcaagggcgtcatctgcgagaagtgcggcgtggaagtcacgcttgcgcgcgtccggcgc
gagcgcatgggccatatcgagctcgccgctcccgtcgcgcatatctggttcctgaagtcg
ctgccctcgcgcatcggcctcctgatggacatgccgctcaaggatctcgagcgcattctc
tatttcgagtcctatgtcgtcatcgagccgggcctgacgcctctcaaggaccgtcagatc
ctgtccgaggaagagtatgtccgctgccaggaagagtatggcgctgacaccttcacggcg
atgatcggcgcggaagccatccgcgagatgctgcgcgcgctcgaccttgaccagatcaac
gccgatctcaagcatgagatcgcgacgacgacgtcggagctgaagcccaagaagctgatg
aagcgcctcaagatcatcgaggcgttccagcagtccggcaacaagccggaatggatggtc
atgaccatcattccggtgatcccgcccgatctgcgcccgctggtgccgctcgatggcggc
cgcttcgcgacctccgacctgaacgacctctatcgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatcgaattgcgcgcacccgacatcatcatccgcaacgagaagcggatg
ctgcaggaatcggtcgatgcgctgttcgataacggtcgccgtggccgcgtcatcacgggc
gccaacaagcgcccgctgaagtcgctcgccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggc
ccggagatgaagctgcaccagtgcgggctgcccaagaagatggcgctcgagctgttcaag
ccgttcatctatgcgcgcctcgacgccaagggctactcgaccacggtcaagcaggccaag
aagctggtcgagaaggagaagcccgaggtctgggacatcctggacgaggtcatccgcgag
catccggtgctgctgaaccgcgccccgacgctgcacaggctcggcatccaggccttcgag
ccggtgctgatcgaaggcaaggcgatccagcttcacccgctggtctgcgctgccttcaac
gccgacttcgacggcgaccagatggccgtgcacgttccgctgtcgctggaagcgcagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgcacccggccaacggtcttccg
atcatcgtgccgtcgcaggacatcgtgctcggcctctactacctctcgatcgtctctgac
ggcgagccgggccagggcaagatcttcggcgacttcggcgagctcgaatacgcgctgcac
gagaaggtcgtgacgctgcattcgaagatcaaataccgctggaccggcgtcaatcaggac
ggcaagtcctacaccaagatctacgacaccacgcctggccgcgtcattctctcgaccgcg
ctgcccaagcacccgaacatgaccttcgacgtcagcaaccgcctgatgacgaagaaggaa
atctcggggatgatcgacgccgtctatcgcggctgcggtcagaaggaatcggtgatcttc
tgcgaccgcatcatgtcgctgggcttcacccacgccttcaaggccggcatctccttcggc
aaggacgacatggtcgtgccggagaacaagtgggagatcgtcgacaccacccgcgcgctc
gccaaggattacgagcagcagtaccaggacggcctgatcactcagggcgagaagtacaac
aaggtcgtcgacgcctgggcgaagtgctccgacaagctcgcccaggagatgatggcccgc
atctcgaccgtgaagaaggacgagaacggtcgcgataagccgatcaactcgatctacatg
atgagccactccggagcgcgtggttcgccagcccagatgaagcagctcgcggcgatgcgc
ggcctgatggccaagccctcgggcgagatcatcgagtcgccgatcatctcgaacttcaag
gaaggcctcgacgttctcgagtacttcaactcgacccacggcgcccgcaagggcctcgcc
gataccgcgctcaagacggccaactccggctatctcacgcgccgtctcgtcgacgtggcg
caggacgccatcatctccgaggtcgattgcggctcggagagcggcatcaagatgcgcgcc
atcatcgacgcgggtcaggtcgtcgcttcgctcggcatccgcatcctcggccgctcggcg
gcagaagatgtcaccgacatcgacggcaaggtcctggtgccgaagggcacgatgatcgac
gagcaccacatcgaggcgatcaacgccgccggtgtgcaggaggtgaagatccgttcggtg
ctgacctgcgccacaaagaacggcgtctgcgccacctgctatggacgcgatcttgctcgc
ggcacgcccgtcaacatgggcgaggccgtcggtgtcatcgcggcgcagtcgatcggcgag
ccgggtacgcagctcaccatgcgcaccttccacatcggtggtgcggcgacgatcgccgac
cagtccttcgtcgagtcgaacttcgaaggcgtggtcaagatccgcaaccgcaacctcgcc
cggaattcggacggcgacctgatcgcaatggcgcgcaacatcgccgtcgtgatcgtgggg
ccggacggcgccgagcgcgcggttcaccgcgtccagttcggctcgaagctgcgcatcgac
gaaggcgacaaggtcaagcgcggccagcgcctgatcgagtgggatccctattcccgcccg
atcctggccgaggtcgacggctccgtcggcttcgaggacctggtcgacggcatgtcgatc
accgagacgaccgacgaagcgacgggcatcaacaagcgcgtcgtcatcgactggcgcggc
tcggcccgtacgtccgatctgcgcccggctctgacggtgcatggcccggacggcaagatc
gccaagctcgcgcgtggcggtgaagcccgctacatcctgcctgtcgacggcatcatctcg
gtcgagcccggctcccatatcaaggcgggtgacgtgctggcccgtgtttcgacggactcc
gccaagacccgcgacatcaccggcggtctgccgcgggtggcggagctgttcgaggcgcgt
cgtcccaaggatgcggcgatcatcgccgagaaggccggcgtcatcggcttcggcaaggac
tacaagaacaagcgccgggtcacgctgaccccgcatgacggttccgaggggctcgagtac
ctgatccccaagggcaagcacatccatctccaggacggcgacgtcgtggagacgggcgac
tacatcctcgatggcaacccggccccgcacgacatcctggcgatcaagggcgtcgaggag
ctggcggcttatctggtgaacgagatccaggaggtctatcgcctccagggcgtgggcatc
aacgacaagcacatcgaggtcatcgtccggcagatgctgcagaagatcgagatcaccgag
tcgggtgacaccgacatcctgaccggtgaccaggtcgaccgcatcgagctgcaggagatc
aatgcgaagatgaaggaggagggcaagaagcccgcttccggcgtccccgtgctgctcggc
atcaccaaggcgagcttgcagacccgctccttcatctcggcggcgtcgttccaggagacc
acccgcgtcctcaccgaggcggcggtcaacggcaagtacgacacgctggaaggcctcaag
gagaacgtcatcgtcggctcgctgatcccggctggcaccggcgcgcaggtcgcccgtatc
aagcaggtggcgacgcgtcgcgacgatctcatcgtcggtcagaaggccgatgcggcggcg
aaggcggcggcctcagcggccaaggcggcagctgcaacagcggccgcagtggcggcggca
ctgcccgcggccgaatga
DBGET
integrated database retrieval system
