Allobosea sp. 685: RMR04_16780
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Entry
RMR04_16780 CDS
T10282
Name
(GenBank) PLP-dependent aspartate aminotransferase family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
bose Allobosea sp. 685
Pathway
bose00260
Glycine, serine and threonine metabolism
bose00270
Cysteine and methionine metabolism
bose00450
Selenocompound metabolism
bose00670
One carbon pool by folate
bose01100
Metabolic pathways
bose01110
Biosynthesis of secondary metabolites
bose01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
bose00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RMR04_16780
00270 Cysteine and methionine metabolism
RMR04_16780
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RMR04_16780
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RMR04_16780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bose04147
]
RMR04_16780
Enzymes [BR:
bose01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
RMR04_16780
Exosome [BR:
bose04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RMR04_16780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
SelA
Motif
Other DBs
NCBI-ProteinID:
WNJ88076
LinkDB
All DBs
Position
complement(3295524..3296705)
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AA seq
393 aa
AA seq
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MSGVADRIATRAVHAGHEPASHQGAAVPPLYASATFVAPDTATLEGLNDGSVRGYVYSRI
RNPTVLAAEQRLASLEGAESAVLFSSGMAAVAGALAPLLAAGDELVATPDLYGGTLRYFT
EVLPRQGVSVRLAASGAAEDVASCLSPATTVIYTETPTNPLLRIVDLAAMAGLARKHGAR
LVVDGTLGGPLNQTPLAQGADLVVHSASKYLNGHGDIIAGAVVGSRELTRRLRTLQQASG
AILDPHPAWLLLRGMATYPLRMAQHNRGGEAVAAFLASHPKVLRVHYPGLASHPDHALAC
RQMTGFGGLMSFELADGVAARTVVDCTRLFGIGASLGGVESLISQPGNTSHHSVPTERRL
AMGIAPGLVRISVGIEDPQDLIADLDQALAAIP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtggcggaccggatcgcgacccgcgcggttcatgccggccatgagcccgcc
tcgcatcagggcgcggcggtcccgccgctctatgcgtcggcgacctttgttgcgcccgat
accgcgacccttgaagggctgaacgacggctcggtccggggttatgtctacagccgcatc
cgcaacccgacggtgctggccgccgagcagcggctggcttcgctcgaaggcgcggaatcg
gcggtgctgttctcctccggcatggcggcagtcgccggagcgctggcgccgctgctggcg
gcgggcgacgaactggttgcgacgcccgatctttacggcggcacgctgcgctatttcacc
gaggtgctgccgcggcagggcgtgagcgtgcgcctggcggcctcgggggcggccgaggac
gtcgcttcctgcctgtcgccggccacgacggtgatctacacggagacgccgacgaaccct
ttgctgcgcatcgtcgatctggcggccatggccggcctcgcgcgcaagcatggagccagg
ctggtggtcgacggcacgctcggtggcccgttgaaccagacccccctggctcagggcgcc
gatctggtggtgcattcggcgtcgaaatatctcaacggccatggcgacatcatcgccggc
gcggtcgtcgggtcccgcgaattgacgcgcaggctgcggacgctgcagcaggcctcgggc
gctattctcgatccgcatccggcctggctcctgctgcgcggcatggcgacctatccgttg
cgcatggcccagcacaacaggggcggcgaagcggtggcggcgttcctcgcctcccatcca
aaggtgctgcgggtgcattatcccgggctggcgagccatcccgaccacgcgctggcctgc
cgccagatgaccggcttcggcggcctgatgtccttcgaactcgccgatggcgtcgctgcg
cggacggtggtggactgcacgcggctgttcggcatcggggccagtctgggaggcgtcgag
agcctgatctcccagcccggtaacacctcgcaccactccgtcccgaccgagcgccggctc
gccatggggattgcgccgggtctcgtgcggatttcggtcggaatcgaggatccgcaggat
ttgattgccgatctcgaccaggcgctggcggcaattccatga
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