Bosea sp. 685: RMR04_29465
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Entry
RMR04_29465 CDS
T10282
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bose Bosea sp. 685
Pathway
bose03030
DNA replication
bose03410
Base excision repair
bose03420
Nucleotide excision repair
bose03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bose00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RMR04_29465 (polA)
03410 Base excision repair
RMR04_29465 (polA)
03420 Nucleotide excision repair
RMR04_29465 (polA)
03440 Homologous recombination
RMR04_29465 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bose03032
]
RMR04_29465 (polA)
03400 DNA repair and recombination proteins [BR:
bose03400
]
RMR04_29465 (polA)
Enzymes [BR:
bose01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RMR04_29465 (polA)
DNA replication proteins [BR:
bose03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RMR04_29465 (polA)
DNA repair and recombination proteins [BR:
bose03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RMR04_29465 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RMR04_29465 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Taq-exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WNJ90455
UniProt:
A0AA95ZEJ3
LinkDB
All DBs
Position
6051480..6054518
Genome browser
AA seq
1012 aa
AA seq
DB search
MSETAPKTTAPDLKPGDHLFLVDGSNFIFRAYFQSINQDRKYNARSDGLPSGAVRLFATK
LFQFVKDGVLGVKPTHLAIVFDKTENSFRKALYPAYKGNRSEPPADLIPQFPLMREAVRA
FGLIPVEQDVYEADDLIATYARQAREAGADVLIVSADKDLMQLVGPGVAMYDPASGDAKK
GAGFRAERRIGEPEVVEYFGVMPNRVVDVQALAGDATDNVPGAPGIGIKTAAQLIGEYGD
LETLLARAGEIKQPKRRETLTNPEVIEKVRISHKLVTLVDDVKVETPLSHLTLADPDPAK
LVAFLKAMEFTTITKRVAEAYGADVAAIDADEALAPGGTRAAELKALYIGGDASDGFSVA
PAASVDAEPAGAAAPADDGWMKPSELAAARKNEAIAGKIDRAAYECVRTLTDLERWIGWA
YEAGHVALDTETNSLDAMQADLVGISLAVAPGRACYIPLQHRGGTDLFGSGMVEGQIPLD
QAVAALKPLLVDPGVLKIGQNLKYDLLILERHGLSVAPIEDTMLISYALDAGNNTHGMDR
LSELHLGHETIPFSQVAGTGKAQVTFDKIALDKATEYAAEDADVTLRLWRALKPRLAAEG
KTTVYETLERPLIAVLARMEQRGIAIDRQILSRLSGEFAQSLARLEDEIYEVAGEKFLIG
SPKQLGDILFGKMGLSGAKKTATGQWATGAGVLEELAEQGHPLPSKILEWRQLAKLKSTY
TDSLPTYLHPQTNRVHTSYALAATTTGRLSSSEPNLQNIPIRTEAGRKIRTAFVAEKGHK
LISADYSQIELRLLAHIADIPQLRQAFADGIDIHAMTASEMFGVPVQGMPSEVRRRAKAI
NFGIIYGISAFGLANQLAISREEAGAYIRKYFERFPGIRDYMDQTKTFVRANGHVTTIFG
RVCHFPAVASKNPSERAFVERQAINAPIQGSAADIIRRAMIRMEGALAAARLDARMLLQV
HDELVFEVPDAQVEATLPVVRQVMVDAPHPAVQLRVPLQVDARAASNWDEAH
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacagccccgaagaccaccgcccccgacctgaagcccggcgaccatctcttc
ctggtcgacggctcgaacttcatcttccgcgcctatttccagtcgatcaatcaggacagg
aaatacaatgcgcgctccgatggcctgccctccggcgcggttcggcttttcgcgaccaaa
ctgttccaattcgtcaaggacggcgtgctcggggtgaagcccacccatctcgccatcgtc
ttcgacaagaccgagaactcgttccgcaaggcgctctaccccgcctataagggtaaccgc
tccgagccgccggccgatctgatcccgcaattcccgctgatgcgcgaggcagtgcgcgcc
ttcgggctgatcccggtcgagcaggatgtctacgaggccgatgacctgatcgcgacctat
gccagacaggcgcgcgaggccggggccgacgtgctgatcgtctccgccgacaaggatctg
atgcagctcgtggggccgggcgtggcgatgtatgatccggcctcgggcgacgccaagaag
ggcgccggcttccgggccgaacgccggatcggcgagcctgaagtggtcgagtatttcggc
gtgatgccgaacagggtggtggatgtgcaggcgctggccggcgatgcgaccgacaatgtg
ccgggcgcgccgggcatcggcatcaagacggcggcccagctcatcggcgaatatggcgac
ctggagacgctgctggcgcgggccggcgagatcaagcagcccaagcgccgggagaccctg
accaatcccgaggtgatcgagaaggtgcgcatctcgcacaagctcgtgacgctggtcgac
gatgtgaaggtcgagaccccgctctcgcatctgacgctggccgatcccgatccggccaag
ctcgtcgccttcctcaaggcgatggagttcaccacgatcaccaaacgcgtcgccgaggcc
tatggggccgatgtcgcggcgatcgacgccgacgaggcgctggccccgggcggcacgcgc
gcggccgaattgaaggcgctctatatcggcggcgatgcgagcgacggtttttccgttgcc
cccgcggcgtcagttgatgccgagcccgcaggcgcggccgcaccagccgacgatggctgg
atgaagccgtccgagctcgcagcggcccgcaagaacgaagcgatcgccgggaagatcgac
cgcgcggcttacgaatgcgtgcgcacgctcaccgatctcgagcgctggatcggttgggcc
tatgaggccggccatgtcgcgctcgacaccgagaccaattcgctcgacgcgatgcaggcc
gatctcgtcggcatttcgcttgcggtcgcgcccggacgcgcctgctacatcccgctgcag
catcgcggcggcaccgatttgttcggcagcggcatggtcgaggggcagatcccgctcgac
caggcggtggcggcgctcaagcccctgctggtcgatccaggcgtcctgaagatcggccag
aacctgaaatacgacctgctgatcctcgaacggcacgggctttccgtcgccccgatcgag
gacacgatgctgatttcctatgcgctcgacgccggcaacaacactcacggcatggaccgg
ctctccgagctgcatctcggccatgagacgatcccgttctcgcaagtcgcgggcaccggc
aaggcgcaagtgaccttcgacaagatcgcactcgacaaggcgacggaatacgccgctgag
gatgccgatgtgacgctgcggctctggcgtgcgctcaagcccaggctcgcggccgagggc
aagaccacggtctacgagacgctggagcggccgctaatcgccgtgctcgcccggatggaa
cagcgtggcatcgccatcgaccgccagatcctgtcgcggctctcgggcgagttcgcgcaa
tcgctggcgcggctggaagacgagatctacgaggtggccggcgagaaattcctgatcggc
agcccaaaacagctcggcgacatcctgttcggcaagatggggctttccggcgccaagaaa
accgcgaccgggcaatgggcgaccggagccggcgtgctcgaggagctcgccgagcagggc
cacccactaccctcgaagatcctggaatggcgccagctcgccaagctgaaatcgacctat
acggactcgctgccgacctatctgcacccgcagaccaaccgggtgcacacctcctatgcg
ctggcggcgacgaccacgggccgcctctcctcctccgagcccaatctgcagaacatcccg
atccgcaccgaggccggccgcaagatcaggaccgccttcgtggccgaaaagggccacaag
ctgatctcggccgattacagccagatcgaactgcgcctgctcgcccatatcgccgacatc
ccgcagctccggcaggcctttgccgacggtatcgacatccatgcgatgacggcctcggaa
atgttcggcgtgccggtccagggcatgccgagcgaggtgcggcgccgcgccaaggcgatc
aatttcggcatcatctacggcatttcggccttcggccttgccaatcagctcgcgatcagc
cgcgaggaggccggcgcctatatccgcaaatatttcgagcgcttcccgggcatccgcgac
tatatggaccagaccaagaccttcgtgcgggccaacggccatgtcacgacgatcttcggc
cgggtttgccatttcccggcagtcgcctcgaagaacccctccgagcgcgccttcgtcgag
cgccaggcgatcaacgcaccgatccagggctcggccgccgacattatccgccgcgccatg
atccggatggagggcgcgcttgccgcggccaggctcgacgcccgcatgctgctgcaggtg
catgacgaacttgtcttcgaggtgcccgacgcccaggtcgaggcgaccttgccggtggtc
cgccaggtgatggtggatgcaccgcacccggctgtgcaattgcgcgtgcccttgcaggtc
gatgcgcgggcggccagcaactgggacgaggcgcattga
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