KEGG   Bosea sp. 685: RMR04_29465
Entry
RMR04_29465       CDS       T10282                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bose  Bosea sp. 685
Pathway
bose03030  DNA replication
bose03410  Base excision repair
bose03420  Nucleotide excision repair
bose03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bose00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RMR04_29465 (polA)
   03410 Base excision repair
    RMR04_29465 (polA)
   03420 Nucleotide excision repair
    RMR04_29465 (polA)
   03440 Homologous recombination
    RMR04_29465 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bose03032]
    RMR04_29465 (polA)
   03400 DNA repair and recombination proteins [BR:bose03400]
    RMR04_29465 (polA)
Enzymes [BR:bose01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RMR04_29465 (polA)
DNA replication proteins [BR:bose03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     RMR04_29465 (polA)
DNA repair and recombination proteins [BR:bose03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     RMR04_29465 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RMR04_29465 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc Taq-exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: WNJ90455
UniProt: A0AA95ZEJ3
LinkDB
Position
6051480..6054518
AA seq 1012 aa
MSETAPKTTAPDLKPGDHLFLVDGSNFIFRAYFQSINQDRKYNARSDGLPSGAVRLFATK
LFQFVKDGVLGVKPTHLAIVFDKTENSFRKALYPAYKGNRSEPPADLIPQFPLMREAVRA
FGLIPVEQDVYEADDLIATYARQAREAGADVLIVSADKDLMQLVGPGVAMYDPASGDAKK
GAGFRAERRIGEPEVVEYFGVMPNRVVDVQALAGDATDNVPGAPGIGIKTAAQLIGEYGD
LETLLARAGEIKQPKRRETLTNPEVIEKVRISHKLVTLVDDVKVETPLSHLTLADPDPAK
LVAFLKAMEFTTITKRVAEAYGADVAAIDADEALAPGGTRAAELKALYIGGDASDGFSVA
PAASVDAEPAGAAAPADDGWMKPSELAAARKNEAIAGKIDRAAYECVRTLTDLERWIGWA
YEAGHVALDTETNSLDAMQADLVGISLAVAPGRACYIPLQHRGGTDLFGSGMVEGQIPLD
QAVAALKPLLVDPGVLKIGQNLKYDLLILERHGLSVAPIEDTMLISYALDAGNNTHGMDR
LSELHLGHETIPFSQVAGTGKAQVTFDKIALDKATEYAAEDADVTLRLWRALKPRLAAEG
KTTVYETLERPLIAVLARMEQRGIAIDRQILSRLSGEFAQSLARLEDEIYEVAGEKFLIG
SPKQLGDILFGKMGLSGAKKTATGQWATGAGVLEELAEQGHPLPSKILEWRQLAKLKSTY
TDSLPTYLHPQTNRVHTSYALAATTTGRLSSSEPNLQNIPIRTEAGRKIRTAFVAEKGHK
LISADYSQIELRLLAHIADIPQLRQAFADGIDIHAMTASEMFGVPVQGMPSEVRRRAKAI
NFGIIYGISAFGLANQLAISREEAGAYIRKYFERFPGIRDYMDQTKTFVRANGHVTTIFG
RVCHFPAVASKNPSERAFVERQAINAPIQGSAADIIRRAMIRMEGALAAARLDARMLLQV
HDELVFEVPDAQVEATLPVVRQVMVDAPHPAVQLRVPLQVDARAASNWDEAH
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgagcgagacagccccgaagaccaccgcccccgacctgaagcccggcgaccatctcttc
ctggtcgacggctcgaacttcatcttccgcgcctatttccagtcgatcaatcaggacagg
aaatacaatgcgcgctccgatggcctgccctccggcgcggttcggcttttcgcgaccaaa
ctgttccaattcgtcaaggacggcgtgctcggggtgaagcccacccatctcgccatcgtc
ttcgacaagaccgagaactcgttccgcaaggcgctctaccccgcctataagggtaaccgc
tccgagccgccggccgatctgatcccgcaattcccgctgatgcgcgaggcagtgcgcgcc
ttcgggctgatcccggtcgagcaggatgtctacgaggccgatgacctgatcgcgacctat
gccagacaggcgcgcgaggccggggccgacgtgctgatcgtctccgccgacaaggatctg
atgcagctcgtggggccgggcgtggcgatgtatgatccggcctcgggcgacgccaagaag
ggcgccggcttccgggccgaacgccggatcggcgagcctgaagtggtcgagtatttcggc
gtgatgccgaacagggtggtggatgtgcaggcgctggccggcgatgcgaccgacaatgtg
ccgggcgcgccgggcatcggcatcaagacggcggcccagctcatcggcgaatatggcgac
ctggagacgctgctggcgcgggccggcgagatcaagcagcccaagcgccgggagaccctg
accaatcccgaggtgatcgagaaggtgcgcatctcgcacaagctcgtgacgctggtcgac
gatgtgaaggtcgagaccccgctctcgcatctgacgctggccgatcccgatccggccaag
ctcgtcgccttcctcaaggcgatggagttcaccacgatcaccaaacgcgtcgccgaggcc
tatggggccgatgtcgcggcgatcgacgccgacgaggcgctggccccgggcggcacgcgc
gcggccgaattgaaggcgctctatatcggcggcgatgcgagcgacggtttttccgttgcc
cccgcggcgtcagttgatgccgagcccgcaggcgcggccgcaccagccgacgatggctgg
atgaagccgtccgagctcgcagcggcccgcaagaacgaagcgatcgccgggaagatcgac
cgcgcggcttacgaatgcgtgcgcacgctcaccgatctcgagcgctggatcggttgggcc
tatgaggccggccatgtcgcgctcgacaccgagaccaattcgctcgacgcgatgcaggcc
gatctcgtcggcatttcgcttgcggtcgcgcccggacgcgcctgctacatcccgctgcag
catcgcggcggcaccgatttgttcggcagcggcatggtcgaggggcagatcccgctcgac
caggcggtggcggcgctcaagcccctgctggtcgatccaggcgtcctgaagatcggccag
aacctgaaatacgacctgctgatcctcgaacggcacgggctttccgtcgccccgatcgag
gacacgatgctgatttcctatgcgctcgacgccggcaacaacactcacggcatggaccgg
ctctccgagctgcatctcggccatgagacgatcccgttctcgcaagtcgcgggcaccggc
aaggcgcaagtgaccttcgacaagatcgcactcgacaaggcgacggaatacgccgctgag
gatgccgatgtgacgctgcggctctggcgtgcgctcaagcccaggctcgcggccgagggc
aagaccacggtctacgagacgctggagcggccgctaatcgccgtgctcgcccggatggaa
cagcgtggcatcgccatcgaccgccagatcctgtcgcggctctcgggcgagttcgcgcaa
tcgctggcgcggctggaagacgagatctacgaggtggccggcgagaaattcctgatcggc
agcccaaaacagctcggcgacatcctgttcggcaagatggggctttccggcgccaagaaa
accgcgaccgggcaatgggcgaccggagccggcgtgctcgaggagctcgccgagcagggc
cacccactaccctcgaagatcctggaatggcgccagctcgccaagctgaaatcgacctat
acggactcgctgccgacctatctgcacccgcagaccaaccgggtgcacacctcctatgcg
ctggcggcgacgaccacgggccgcctctcctcctccgagcccaatctgcagaacatcccg
atccgcaccgaggccggccgcaagatcaggaccgccttcgtggccgaaaagggccacaag
ctgatctcggccgattacagccagatcgaactgcgcctgctcgcccatatcgccgacatc
ccgcagctccggcaggcctttgccgacggtatcgacatccatgcgatgacggcctcggaa
atgttcggcgtgccggtccagggcatgccgagcgaggtgcggcgccgcgccaaggcgatc
aatttcggcatcatctacggcatttcggccttcggccttgccaatcagctcgcgatcagc
cgcgaggaggccggcgcctatatccgcaaatatttcgagcgcttcccgggcatccgcgac
tatatggaccagaccaagaccttcgtgcgggccaacggccatgtcacgacgatcttcggc
cgggtttgccatttcccggcagtcgcctcgaagaacccctccgagcgcgccttcgtcgag
cgccaggcgatcaacgcaccgatccagggctcggccgccgacattatccgccgcgccatg
atccggatggagggcgcgcttgccgcggccaggctcgacgcccgcatgctgctgcaggtg
catgacgaacttgtcttcgaggtgcccgacgcccaggtcgaggcgaccttgccggtggtc
cgccaggtgatggtggatgcaccgcacccggctgtgcaattgcgcgtgcccttgcaggtc
gatgcgcgggcggccagcaactgggacgaggcgcattga

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