Bosea sp. 685: RMR04_31805
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Entry
RMR04_31805 CDS
T10282
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
bose Bosea sp. 685
Pathway
bose00630
Glyoxylate and dicarboxylate metabolism
bose00680
Methane metabolism
bose01100
Metabolic pathways
bose01120
Microbial metabolism in diverse environments
bose01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
bose00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RMR04_31805 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
RMR04_31805 (fdhF)
Enzymes [BR:
bose01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RMR04_31805 (fdhF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4
Fer4_10
Fer4_9
Fer4_6
Fer4_15
Fer4_21
Fer4_16
Fer4_NDSU1
Motif
Other DBs
NCBI-ProteinID:
WNJ90884
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All DBs
Position
6530840..6533722
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AA seq
960 aa
AA seq
DB search
MSLIKEIDFGTPIRVSEKQVTLTIDGQSVTVPAGTSVMAAAMSAGTKIPKLCATDMLEPF
GSCRLCLVEIEGRRGTPSSCTTPAEEGMVVRTQTEQLSTLRKGVMELYISDHPLDCLTCS
ANGDCELQDMAGAVGLREVRYGYEGENHVFAKTADGLANENWLAKDTSNPYFTYDPTKCI
VCNRCVRACEEVQGTFALTITGRGFDSRVAPGPTDFLGSECVSCGACVQACPTATLMENS
VIEMGQPEHSKVTTCAYCGVGCSFKAEMQGDKVVRMVPYKDGKANEGHSCVKGRFAWGYA
THKDRITKPMIREKITDPWREVSWEEAINHAASEFKRIQSRYGRESLGAITSSRCTNEEV
FLVQKLVRAGFRNNNVDTCARVCHSPTGYGLKTTLGTSAGTQDFKSVAKADVILVIGANP
TDGHPVFASRMKKRLRQGAKLIVADPRRIDMVKSPHIKAEHHLQLLPGTNVALINALSHV
VVTEGLIAEDYVRERCDLADFEIWARFIAQEHNSPEASEQFTGVPAADVRAAARLYATAD
NGAIFYGLGVTEHSQGSTMVMGMANLAMATGNIGRDGVGINPLRGQNNVQGACDMGSFPH
EFTGYRHVSDDATRQIFEMMWGVPLDVEPGLRIPNMLDEAVGGTFKALYVQGEDIAQSDP
NTQHVTAGLSAMECVVVQDLFLNETAKYAHVFLPGSSFLEKDGTFTNAERRINRVRQVMA
PLSGKAEWQVTIDFARALGYEMAYAHPSEIMDEIARLTPSFAAVSYDKLDKLGSVQWPCN
EKAPTGTPLMHVDRFVRGKGKFMITEFVPTEERTGARFPLILTTGRILSQYNVGAQTRRT
ANFAWHDEDVLEIHPFDAENRGIKSGDLVALASRSGDISLRAEVSERMQPGVVYTTFHHA
ETGANVITTDFSDWATNCPEYKVTAVEVRRTNYYSQWQERNREEDISLRQIAGRLPDAAE
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgatcaaggagatcgatttcggcacgccgatccgcgtttccgaaaagcaggtc
acgctgacgatcgacgggcagagcgtcacggtcccggccgggacctcggtgatggcggct
gcgatgagcgcgggaaccaagatccccaagctctgcgccaccgacatgctcgagcccttc
ggctcgtgccggctctgcctcgtcgagatcgagggaaggcgcggcacgccttcctcctgc
accaccccggccgaagagggcatggtggttcgcacgcagaccgagcagctctcgacgctg
cgcaagggcgtgatggagctctatatctccgaccacccgctcgactgcctgacctgctcg
gccaatggcgattgcgaattgcaggacatggcgggcgcggtcggcctgcgcgaggtgcgc
tatggctatgagggcgagaaccacgtcttcgccaagacagcggacggcctcgccaatgag
aactggttggccaaggacacctccaacccctatttcacctatgatccgacaaaatgcatc
gtctgcaatcgctgcgtgcgcgcctgcgaggaggtgcaaggcacctttgcgctgacgatc
acgggccgcggcttcgattcgcgcgtcgccccggggccgaccgatttcctgggttccgaa
tgcgtctcctgcggcgcctgcgtgcaggcctgcccgacggcgacgctgatggagaacagc
gtcattgagatgggccagcccgagcattccaaggtcacgacctgcgcctattgcggcgtc
ggctgctcgttcaaggccgagatgcagggcgacaaggtcgtccggatggtgccctacaag
gacggcaaggccaatgagggccattcctgcgtcaagggccgcttcgcctggggttatgcg
acccataaggaccgcatcaccaagccgatgatccgggagaagatcaccgatccctggcgc
gaggtgtcgtgggaggaggcgatcaaccatgcggcctccgagttcaagcgcatccagtcg
cgctatggccgggaatcgcttggcgccatcacctcgtcgcgctgcaccaatgaggaggtt
ttcctcgtccagaaactggtgcgcgccggtttccgcaacaacaatgtcgatacctgcgcc
cgcgtctgccattcgccgacaggctatggcctgaagacgacgctgggcacctcggccggc
acgcaggatttcaaatcggtcgccaaggccgacgtcatcctggtgatcggcgcgaacccg
accgacggccacccggtcttcgcctcacggatgaagaagcgcctgcgtcagggcgccaag
ctgatcgtcgccgatccacgccggatcgacatggtgaagtcgccccatatcaaggcggaa
caccatctccagctcctgcccggcaccaatgtcgcgctgatcaacgcgctcagtcatgtc
gtcgtcaccgaagggctgatcgccgaggattatgtccgcgagcgctgcgacctggccgat
ttcgagatctgggcccgcttcatcgcgcaggagcataattcgcccgaggcgagcgagcag
ttcaccggcgtgccggcggccgatgtccgcgccgcggcgcggctctacgccaccgccgat
aatggcgcgatcttctatgggcttggcgtcaccgagcacagccagggctcgaccatggtg
atgggcatggccaatctcgccatggcgacgggcaatatcgggcgcgacggcgtcggcatc
aatccgctgcgcggccagaacaatgtccagggcgcctgcgacatgggctccttcccgcac
gagttcaccggctaccgccatgtctcggacgatgcgacgcgccagatcttcgagatgatg
tggggcgtgccgctggacgtggagccgggcctgcgcatccccaacatgctcgacgaggcg
gtcggcggcaccttcaaggcgctctatgtccagggcgaggatatcgcccagtccgaccca
aacacgcagcacgttacggccggcctgtctgcgatggaatgtgtcgtggtgcaggatctc
ttcctgaacgagacggcgaaatacgcccatgtcttcctgccgggctcctccttcctggag
aaggacggcaccttcaccaatgccgagcgccgcatcaaccgcgtccggcaagtgatggcg
ccgctctcgggcaaggccgaatggcaggtcacgatcgatttcgcccgggcgctcggctac
gagatggcctatgcgcatcccagcgagatcatggacgagatcgcgcggctgacgccgagc
ttcgctgcggtaagctatgacaagctcgacaagctcggctccgtgcaatggccctgcaat
gagaaggcgccgaccggcacgcccttgatgcatgtcgaccgcttcgtgcgcggcaagggc
aagttcatgatcaccgaattcgtgcccaccgaggagcgcactggcgcgcgcttcccgctg
atcctgacgacggggcgcatcctctcgcaatataatgtcggcgcgcagacacggcgcacg
gccaacttcgcctggcatgacgaggacgtgctcgagatccaccccttcgacgccgagaat
cgcggcatcaaatcaggcgatctcgtcgcgctcgccagccgctccggcgacatctccttg
cgcgccgaggtctcggagcggatgcagccgggcgtggtctacacgaccttccatcatgcc
gagaccggcgccaacgtcatcaccacggatttctcggactgggcgaccaattgcccggaa
tacaaggtgacggcggtcgaggtcaggcggacgaattattattcgcaatggcaggagcgc
aaccgcgaggaagacatctcgctgcgccagatcgcggggcgtttgcccgatgccgcggaa
tag
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