Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_00670
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Entry
GKR98_00670 CDS
T10172
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bosg03009
]
GKR98_00670
Enzymes [BR:
bosg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
GKR98_00670
Ribosome biogenesis [BR:
bosg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GKR98_00670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QMU56849
LinkDB
All DBs
Position
127396..128436
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AA seq
346 aa
AA seq
DB search
MSAVQMLTVSEDDSDQRLDRWFRRIFPHVPQGRIEKMCRKGEIRVDGGRVKAATRLEAGQ
QVRIPPLPVGQAPKPDRSNLSDADVKLMQSSVLWRDDYLIVLNKPPGLPTQGGSKQTRHI
DGLADALRFGYDEKPRLVHRLDKDTSGVLVLARTRKIASALTEAFRHRDTRKIYWAAVAG
VPQPSMGTIRFGLVKAPGHGARGEGEKMMAVHPRDVDSTPDAKRATTDYALLSSLGRRVS
WAALVPITGRTHQLRAHMAEIGHPIVGDGKYGGSAQENLGDGWGAQLGGELSRKLHLHAR
QLTLEHPVTGNLQTFIAPLPEHMARTWEMFDWNPADVPADPFEELE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggttcagatgctgacagtctccgaggatgattccgatcaacgactggatcgt
tggtttcgtcgcatattcccgcatgtgccgcagggacgcattgagaagatgtgccgtaag
ggtgagatccgtgtggacgggggtcgggtaaaggctgctacgcgtctggaagcgggacaa
caagtgcggatacctcctttgccggtgggacaggcaccaaagccggatcgttcgaacttg
tcggatgccgacgtgaaattgatgcagtcttcggtcttatggcgagacgattatttgatc
gtgcttaacaaacctcccggactgccaacccagggtggtagcaaacagacgcgccatatc
gatggcttggctgatgctttgcgctttggatatgacgaaaagccgagattggtgcaccgg
ctggacaaggatacgtctggcgttctggttctggccaggacgcgcaaaatcgcatccgcc
ttgactgaagcctttcggcatcgcgacacgcgcaagatatactgggcggcggttgccggt
gttccgcagccatcaatgggtactattcggtttggcctcgtcaaagcgccgggtcatggc
gcacggggcgagggcgagaagatgatggccgtgcatcctcgcgatgttgactccacgcca
gatgccaagcgcgccacgactgactatgcgcttttgtcatcgctgggacggcgggtgagt
tgggcggcccttgtgcccataaccggacgcacacatcagttgcgcgcgcatatggcggag
atcgggcatcccattgttggagatgggaaatatggcggatcggcgcaggagaatttaggt
gacggctggggcgcgcaattgggcggtgagctgagccggaagctgcaccttcacgctcgc
caattgacattggagcacccggtgacgggcaatttgcagacgttcatcgctccacttcct
gagcatatggcacgtacctgggagatgtttgactggaacccggcggacgttccggctgat
cctttcgaggaattggaatga
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