Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_03475
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Entry
GKR98_03475 CDS
T10172
Name
(GenBank) FCD domain-containing protein
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bosg03000
]
GKR98_03475
Transcription factors [BR:
bosg03000
]
Prokaryotic type
Helix-turn-helix
GntR family
GKR98_03475
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Ortholog
Paralog
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GFIT
Motif
Pfam:
FCD
GntR
HTH_11
Rrf2
TrmB
HTH_Crp_2
FGGY_C
MarR
HVO_A0261_N
Mod_r
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QMU57346
LinkDB
All DBs
Position
679561..680268
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AA seq
235 aa
AA seq
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MPSSSEHVLAVVRGQILRGERAPGDKINEVGIASDLEVSRTPARTALAALEAEGLIERRQ
GRGFTIRSISAADVAKAIDVRSALEGLAAQTMAKSGMSDEAEQKLLDSIAISQAVLDSDD
PDTDFIGGYTEANKIYHQTIMHDCGNDLIAHTFERIAMLPLTALGTLAFDKTNYKRERMR
LTVGHSQHVIIFDALKKREGQRAEALMREHSNATLNYTDLFVKKVYDQGRGRRQH
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgccatctagctcggaacatgtacttgccgtcgtgcgtggccagattttgcgtggtgaa
cgtgcgcccggtgacaagattaacgaggtgggcattgcctccgaccttgaagtatctcga
acacctgcccggacagctttggctgcacttgaggccgaaggccttatagagcgtcggcag
ggccgaggattcacaatccggtctatctctgctgcagatgttgccaaagcaatcgatgtt
cgttcagcattggagggtctggccgcccagacgatggccaaatccggaatgtccgacgaa
gctgaacaaaaactattggactccatcgctatttcgcaagccgttctggatagcgacgat
ccagataccgacttcatcggcggctacaccgaagccaacaagatttatcaccagacgatc
atgcacgattgtggcaacgacttaatcgcgcacacattcgagcgcattgcaatgttgcct
cttacggcgctgggcacactggcctttgacaagacaaactacaaacgagagcgcatgagg
ctgacggttggtcattctcagcacgtgattatattcgatgccctgaagaaaagagaagga
caacgcgccgaagcgttgatgcgagagcacagtaatgcaacgctgaactacaccgacctt
ttcgtcaaaaaagtctacgatcagggtcgggggcgaaggcagcattga
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