Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_05710
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Entry
GKR98_05710 CDS
T10172
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Pathway
bosg03018
RNA degradation
Brite
Enzymes [BR:
bosg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
GKR98_05710
Messenger RNA biogenesis [BR:
bosg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GKR98_05710
Ribosome biogenesis [BR:
bosg03009
]
Prokaryotic type
rRNA processing factors
GKR98_05710
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QMU57738
UniProt:
A0A7D7ZL33
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Position
complement(1139945..1142713)
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AA seq
922 aa
AA seq
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MSKKMLIDATHAEETRVVVVDGNKVEEFDFESENKRQLAGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPVADREALLAEEMAYAEAEAAEEDKPKKRRGRGRGKSKA
AEATKDETVTAEVPAEETPAETEAAESGEDVKPQTEAEVAAADDAVVEPVAEEAGSSESE
EAGANAEKPEETPAEAKSSEESTAEEPVAEDASTEAPADGADAKLAAIPGMDVVDLDDSD
DEDPAFEEKESASDKDSSIESVADDDTTEEIRPRRKQRPRRYKIQEVVKVRQILLVQVVK
EERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITNASDRKKLKEIATEIDVPRGAG
LIIRTAGAKRTKTEIKRDYEYLQRMWEQIRELTLKSIAPAQIYEEGNLIKRSIRDLYSRE
IEEVLVEGELGYRTAKDFMKMIMPSHAKNVKFYAEPMPLFARYQVESYLAGMFNPTVQLR
SGGYIVIGVTEALVAIDVNSGKATKENSIEETALKTNLEAAEEVARQLRLRDLAGLIVID
YIDMEERRNNSAVEKRFKDRLKTDSARIQVGRISGFGLMEMSRQRLRPGMLEATTQPCPS
CHGTGLIRSDDSLGLTILRHLEEEGVRRRSREVLVKAPVSIINFLMNHKREHIAQIEARY
GMAVRLEADPFLVSPDFTVEKFKTATRVIDTSAPVVSVDASLMAEIEEELAEEAVAEAAA
TPEADEGEERPKKKRRRRRRRRGGNRDGEAQAQTAEGQGETADVAATEQAAEADAEPAEA
AEVPDAPEAEEAKPKKRTRTRRKKPAKDAEVAAEATPEAAAEEAPSEEVKADTAEVQEEE
KPKKRTRSRAKKKPAAEEAMADATPVESAPVEANGAAVVAEAPAVEAAPEPTPEPAVVAE
VAEAPAEPAKPRRRGWWSVGKG
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaaatgcttatcgatgccacccacgccgaggagactcgggtcgtggtggtt
gacggaaacaaggtcgaggaatttgattttgagtccgaaaacaaacggcaacttgccgga
aatatatatcttgccaaggtaacacgggtcgaaccgtcgcttcaggcggcgtttgtagac
tacggcggcaatcgccacggtttcctggctttctcggaaatccaccctgattactaccag
attcccgtcgcggatcgcgaggctttgctggccgaagaaatggcctatgccgaagccgaa
gcagccgaggaagacaaaccaaagaagcgtcgtggacgcggacgcggcaagtcaaaagcg
gcagaggcgaccaaggatgagacggtaactgccgaagttccggcagaagaaacaccagca
gaaaccgaagccgccgaaagcggcgaggatgttaagcctcaaacagaggccgaagttgct
gctgctgacgatgcggttgtcgagccggttgccgaagaagcggggtcgtctgaatctgag
gaagcaggggcaaacgctgaaaaaccggaagagacgccagccgaagccaagtcgtccgag
gagtccacggcagaagaacctgttgcggaagacgcttcaactgaggcgccagctgatggt
gctgatgcgaaattagcggcaattccgggtatggacgtcgtcgatcttgatgacagcgat
gacgaagaccccgcgtttgaagaaaaagaatctgcgtccgataaggactcgtccatcgag
tcggtggctgacgacgacacaaccgaagaaatccgcccacggcgcaagcaacgtcctcgc
cggtataagatccaagaagtcgttaaagttcgccagatccttttggttcaggtggtcaag
gaagagcgtggtaacaaaggtgctgccctgacgacttacctcagtctagccggtcgttat
tgtgtattgatgccgaataccgcccgtggcggtggtatcagccgcaaaatcaccaatgca
tctgaccgcaagaaactgaaagaaatcgcgaccgaaatcgacgtgccgcgcggtgcgggt
ttgatcattcggacagctggggcaaagcgcaccaagaccgagattaagcgagactatgaa
taccttcagcgcatgtgggaacagatccgtgaattgactttgaagtcgattgcacctgcg
cagatttatgaagaaggcaacctgatcaaacgctcaatccgtgacttgtacagccgcgag
attgaagaagtgctggtcgagggcgagcttggatatcgcaccgccaaagacttcatgaag
atgatcatgccaagccacgccaagaacgtgaagttctatgccgagccaatgccgcttttt
gcgcgctatcaggtggaaagctatctggcgggcatgttcaatccgacggtccagcttagg
tctggtggttacatcgtgattggtgtgaccgaagcactggttgcgattgacgttaactcg
ggcaaggcgacgaaggaaaactcgatcgaggaaacggcgctgaaaaccaaccttgaggct
gcggaagaagtggcccgacagttgcgtttgcgcgacctcgctgggttgattgtgatcgac
tatatcgacatggaagaacgccggaacaactcggcggtcgaaaagcgattcaaggatcgc
ttgaagacagatagtgcccgtattcaggtgggccgcatctctggattcggcttgatggag
atgtcacgccagcgactgcgccccggcatgctggaggccacgacgcaaccttgtccgtcc
tgccatggcacgggcctgatccgttcggacgacagtcttggtctgaccattttgcgtcat
ttggaagaagagggcgtgcgccgtcgttcgcgcgaggttcttgtcaaagcgccggtttcg
atcatcaacttcctgatgaaccacaaacgcgaacatatagcccagatcgaagcgcgctat
ggtatggccgtgcgccttgaggccgatccgttcctggtttcgccagacttcacggtagaa
aagttcaagaccgcgacgcgtgttattgataccagtgcaccggttgtttcggtcgatgcc
tcgctgatggcggagattgaagaagaattggccgaagaggccgtagcggaagcagctgca
acacctgaagcagatgaaggcgaagagcgtccgaagaaaaagcgccgtcgtcgtcgtcgt
cgtcgtggcggcaatcgcgatggcgaagcgcaggctcagacagccgaagggcagggcgag
actgccgatgttgccgccactgagcaagccgcagaggccgatgccgagccagcggaagca
gccgaggtgcctgatgcgccggaagctgaagaagctaaaccgaagaaacgcactcgtacc
cgtcgtaaaaaacctgcgaaggatgccgaagtggctgccgaagctacgcctgaggctgct
gccgaagaggcaccgtccgaagaggtgaaggcagacaccgctgaagtgcaggaagaagag
aagccaaagaaacgaacccgcagccgggccaagaaaaaaccggccgctgaggaagctatg
gcagacgcgacacctgttgaatcggcacctgtcgaggccaacggcgccgcggttgtggcc
gaggcccccgcggttgaagctgcgccagagccaacacctgaacccgcagtcgtcgctgag
gtggctgaagcaccggcggagcctgcaaagccccgtcgtcgtggttggtggtcagtcggt
aaaggctaa
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