Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_09890
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Entry
GKR98_09890 CDS
T10172
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Pathway
bosg03420
Nucleotide excision repair
bosg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKR98_09890
03430 Mismatch repair
GKR98_09890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bosg03400
]
GKR98_09890
Enzymes [BR:
bosg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GKR98_09890
DNA repair and recombination proteins [BR:
bosg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKR98_09890
MMR (mismatch excision repair)
Other MMR factors
GKR98_09890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QMU58475
UniProt:
A0A7D7ZHI9
LinkDB
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Position
complement(1960539..1963232)
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AA seq
897 aa
AA seq
DB search
MSSFADDSDFPDRMPLSAQAVAARPAPYLDELNPAQREAVEALDGPVLMLAGAGTGKTKA
LTTRIAHLLVTGKARPNEILAVTFTNKAAREMKNRVAGHLGQTIERMPWLGTFHAICVKL
LRRHAELIGTETISGLKPDGGVENDAVLLDESEGGQGAYDLGPTPRPGVQATTQANDRSH
LKSNFTILDTDDQVRLMKQLIVAEGIDEKRWPARQLAHIIDGWKNRALTPDKVPAADHGA
FNHRGVELYAAYQQRLLTLNAVDFGDLLLHVVWIFQNHNDVLEQYQRWFKYILVDEYQDT
NVAQYLWLRLLAQSHKNICCVGDDDQSIYGWRGAEVGNILKFEKDFPGAKVIRLEQNYRS
TPHILAAASGVITANQGRLGKTLFTEAEEGWKVKLIGHWDGDEEARWIGEKIESLADGSA
SEAIYRQNPRSKTNSQEAERLSKGGIVSQNSDGDIHQVNLSRANSLSPNGVGNNPVPRKF
ELDEIAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRLSVSPDDDL
AFERIVNTPKRGLGDVAQKKIQTAARTNGVSLVEGARLLLAAKGLGGKGAKELAKLVEGL
SRWHSIVRAGQNHLELAEQILDESGYTEMWQNDKTPEGPGRLENLKELVKALESFENLQG
FLEHVSLIMDNESEDGEAKVSIMTLHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGL
EEERRLAYVGITRAEEIATISFAGNRRVYGQWQSQMPSRFIDELPADHVEVLTPPGLYGG
AFGAAAAPDMAGAPKSDLHDQAAQADGYNSPGWKRLQNRSQHRGMSQPSEAKNMVIDLNA
TSSHTIGDRVFHQKFGYGHITGIEGDKLDIAFNKAGDKKVVAKFVTAAATAGDDVPF
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcttcgccgacgacagtgatttccccgaccgcatgcccctttcggcgcaagcc
gtcgccgcccgtcccgccccctatctggacgaattgaaccccgcccaacgcgaagccgtc
gaggcattggacggccccgtcctgatgctcgctggcgctggaaccggcaaaaccaaggcc
ctgaccacccgcatcgcgcatcttctggtcaccggcaaagcccggcccaacgaaatcctt
gccgtgacattcaccaataaagccgcacgcgagatgaaaaaccgcgtagcagggcatttg
ggtcagaccatagaacgcatgccctggctcggcaccttccacgccatctgtgtcaaactt
ctcagacgccacgccgaactcattggcacagaaactattagcggattgaaaccagacggc
ggggtcgagaatgatgctgtcttgctggacgaaagcgaaggcgggcaaggcgcatatgat
ttgggcccaacgcctcggccaggcgttcaagccacaactcaagccaacgaccgctcccat
ctgaaatccaatttcacaatactggacaccgacgatcaggtccgcttgatgaagcaactg
atcgtcgcggaaggcatcgatgagaaacgctggcccgcccgccaactggcccacatcatc
gatggttggaagaacagagctttgacccccgacaaagttcccgcagccgaccacggagcc
ttcaatcaccgcggtgttgaactatacgccgcatatcaacaacggctgctcaccctaaac
gcagtcgatttcggtgacctgctgctccacgttgtctggatcttccagaaccacaatgac
gtgctggagcaataccaacgctggttcaaatacatcctcgtcgacgaataccaggacacc
aacgtcgcccaatacctctggctgcgacttctggcccaaagccacaagaacatctgctgc
gtcggcgacgacgaccagtccatctacggctggcgcggtgccgaagtaggcaacattctg
aagttcgagaaagatttccccggcgccaaagtcatccggctggaacaaaactaccgctcc
actccccacatccttgccgccgcgtccggtgtcataaccgccaaccagggccggttagga
aagactttgttcactgaagctgaggagggttggaaagttaaattgatcggccactgggac
ggagacgaagaggcccgttggatcggcgagaagatcgagagtcttgccgatggaagtgcg
agtgaagccatttaccggcaaaatccacgctcaaaaactaattcacaggaagccgagcgg
ttgtcgaagggtgggatagtttcccaaaactctgatggtgacattcatcaagtaaatctg
agccgtgcgaatagcctttctcctaacggtgtagggaacaatcctgtgccgcgaaaattc
gagttagatgaaatcgccatcctcgtgcgcgccagccaccaaatgcgcgcgttcgaagac
cgtttcctgactattggccttccctaccgcgtgatcggcggccctcgtttctatgagcgt
atggaaatccgcgatgccatggcctatttccgcctgtcggtcagccctgacgatgacctc
gcgtttgaacgcatcgtaaatactcccaagcgaggcctaggcgacgtcgcccagaagaaa
atccagaccgccgcccgcaccaatggagtgtccctggtcgaaggcgcacgccttctcctc
gcggccaaaggtctcggtggcaagggtgccaaggaactcgccaaacttgtcgaaggtctt
agccgctggcactcgattgtgcgcgcaggccagaaccacctcgaactggccgaacaaatt
ctggacgaaagcggctacaccgagatgtggcaaaacgacaaaacccccgaaggccccgga
cgtttggaaaacctgaaggaactcgtcaaagcgctggaaagtttcgagaacctgcaaggc
ttcctggaacacgtttcgctgatcatggacaacgaaagcgaagacggcgaagccaaagtc
tcgatcatgacactgcatgcggccaaaggtctggaattccccgccgtcttcctgcccggc
tgggaagatgggttgtttccgtcccaacgcagcatggacgaaagcggcctgaagggcttg
gaagaagaacgaaggctggcctacgtcggcatcacccgcgccgaagaaattgcaacgatc
agctttgccggcaaccgtcgggtatacggccagtggcaaagccagatgccctcgcgcttc
attgatgaactgcccgcagatcacgtcgaggtcctgaccccgcccggcctttatggtgga
gccttcggtgccgccgcagcccctgacatggccggtgctcccaaaagcgacttgcacgat
caagccgctcaggccgatgggtacaactcgcctggatggaaacgccttcaaaaccgcagc
cagcatcgcggcatgtcgcagccgtctgaagccaagaacatggtcatcgatctgaacgca
acctcgtctcacaccatcggcgaccgggtgtttcaccaaaaattcggatacggccacatc
accgggatcgaaggcgataagctggatatcgcattcaacaaagccggtgataaaaaggtc
gttgcgaagttcgtcacagcggcggccaccgccggggacgacgttccgttctaa
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