KEGG   Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_09890
Entry
GKR98_09890       CDS       T10172                                 
Name
(GenBank) AAA family ATPase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bosg  Boseongicola sp. MH-Pat-all_autometa_1-3
Pathway
bosg03420  Nucleotide excision repair
bosg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bosg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GKR98_09890
   03430 Mismatch repair
    GKR98_09890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bosg03400]
    GKR98_09890
Enzymes [BR:bosg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GKR98_09890
DNA repair and recombination proteins [BR:bosg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GKR98_09890
   MMR (mismatch excision repair)
    Other MMR factors
     GKR98_09890
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 PcrA_UvrD_tudor AAA_11 CarD_TRCF_RID
Other DBs
NCBI-ProteinID: QMU58475
UniProt: A0A7D7ZHI9
LinkDB
Position
complement(1960539..1963232)
AA seq 897 aa
MSSFADDSDFPDRMPLSAQAVAARPAPYLDELNPAQREAVEALDGPVLMLAGAGTGKTKA
LTTRIAHLLVTGKARPNEILAVTFTNKAAREMKNRVAGHLGQTIERMPWLGTFHAICVKL
LRRHAELIGTETISGLKPDGGVENDAVLLDESEGGQGAYDLGPTPRPGVQATTQANDRSH
LKSNFTILDTDDQVRLMKQLIVAEGIDEKRWPARQLAHIIDGWKNRALTPDKVPAADHGA
FNHRGVELYAAYQQRLLTLNAVDFGDLLLHVVWIFQNHNDVLEQYQRWFKYILVDEYQDT
NVAQYLWLRLLAQSHKNICCVGDDDQSIYGWRGAEVGNILKFEKDFPGAKVIRLEQNYRS
TPHILAAASGVITANQGRLGKTLFTEAEEGWKVKLIGHWDGDEEARWIGEKIESLADGSA
SEAIYRQNPRSKTNSQEAERLSKGGIVSQNSDGDIHQVNLSRANSLSPNGVGNNPVPRKF
ELDEIAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRLSVSPDDDL
AFERIVNTPKRGLGDVAQKKIQTAARTNGVSLVEGARLLLAAKGLGGKGAKELAKLVEGL
SRWHSIVRAGQNHLELAEQILDESGYTEMWQNDKTPEGPGRLENLKELVKALESFENLQG
FLEHVSLIMDNESEDGEAKVSIMTLHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGL
EEERRLAYVGITRAEEIATISFAGNRRVYGQWQSQMPSRFIDELPADHVEVLTPPGLYGG
AFGAAAAPDMAGAPKSDLHDQAAQADGYNSPGWKRLQNRSQHRGMSQPSEAKNMVIDLNA
TSSHTIGDRVFHQKFGYGHITGIEGDKLDIAFNKAGDKKVVAKFVTAAATAGDDVPF
NT seq 2694 nt   +upstreamnt  +downstreamnt
atgagcagcttcgccgacgacagtgatttccccgaccgcatgcccctttcggcgcaagcc
gtcgccgcccgtcccgccccctatctggacgaattgaaccccgcccaacgcgaagccgtc
gaggcattggacggccccgtcctgatgctcgctggcgctggaaccggcaaaaccaaggcc
ctgaccacccgcatcgcgcatcttctggtcaccggcaaagcccggcccaacgaaatcctt
gccgtgacattcaccaataaagccgcacgcgagatgaaaaaccgcgtagcagggcatttg
ggtcagaccatagaacgcatgccctggctcggcaccttccacgccatctgtgtcaaactt
ctcagacgccacgccgaactcattggcacagaaactattagcggattgaaaccagacggc
ggggtcgagaatgatgctgtcttgctggacgaaagcgaaggcgggcaaggcgcatatgat
ttgggcccaacgcctcggccaggcgttcaagccacaactcaagccaacgaccgctcccat
ctgaaatccaatttcacaatactggacaccgacgatcaggtccgcttgatgaagcaactg
atcgtcgcggaaggcatcgatgagaaacgctggcccgcccgccaactggcccacatcatc
gatggttggaagaacagagctttgacccccgacaaagttcccgcagccgaccacggagcc
ttcaatcaccgcggtgttgaactatacgccgcatatcaacaacggctgctcaccctaaac
gcagtcgatttcggtgacctgctgctccacgttgtctggatcttccagaaccacaatgac
gtgctggagcaataccaacgctggttcaaatacatcctcgtcgacgaataccaggacacc
aacgtcgcccaatacctctggctgcgacttctggcccaaagccacaagaacatctgctgc
gtcggcgacgacgaccagtccatctacggctggcgcggtgccgaagtaggcaacattctg
aagttcgagaaagatttccccggcgccaaagtcatccggctggaacaaaactaccgctcc
actccccacatccttgccgccgcgtccggtgtcataaccgccaaccagggccggttagga
aagactttgttcactgaagctgaggagggttggaaagttaaattgatcggccactgggac
ggagacgaagaggcccgttggatcggcgagaagatcgagagtcttgccgatggaagtgcg
agtgaagccatttaccggcaaaatccacgctcaaaaactaattcacaggaagccgagcgg
ttgtcgaagggtgggatagtttcccaaaactctgatggtgacattcatcaagtaaatctg
agccgtgcgaatagcctttctcctaacggtgtagggaacaatcctgtgccgcgaaaattc
gagttagatgaaatcgccatcctcgtgcgcgccagccaccaaatgcgcgcgttcgaagac
cgtttcctgactattggccttccctaccgcgtgatcggcggccctcgtttctatgagcgt
atggaaatccgcgatgccatggcctatttccgcctgtcggtcagccctgacgatgacctc
gcgtttgaacgcatcgtaaatactcccaagcgaggcctaggcgacgtcgcccagaagaaa
atccagaccgccgcccgcaccaatggagtgtccctggtcgaaggcgcacgccttctcctc
gcggccaaaggtctcggtggcaagggtgccaaggaactcgccaaacttgtcgaaggtctt
agccgctggcactcgattgtgcgcgcaggccagaaccacctcgaactggccgaacaaatt
ctggacgaaagcggctacaccgagatgtggcaaaacgacaaaacccccgaaggccccgga
cgtttggaaaacctgaaggaactcgtcaaagcgctggaaagtttcgagaacctgcaaggc
ttcctggaacacgtttcgctgatcatggacaacgaaagcgaagacggcgaagccaaagtc
tcgatcatgacactgcatgcggccaaaggtctggaattccccgccgtcttcctgcccggc
tgggaagatgggttgtttccgtcccaacgcagcatggacgaaagcggcctgaagggcttg
gaagaagaacgaaggctggcctacgtcggcatcacccgcgccgaagaaattgcaacgatc
agctttgccggcaaccgtcgggtatacggccagtggcaaagccagatgccctcgcgcttc
attgatgaactgcccgcagatcacgtcgaggtcctgaccccgcccggcctttatggtgga
gccttcggtgccgccgcagcccctgacatggccggtgctcccaaaagcgacttgcacgat
caagccgctcaggccgatgggtacaactcgcctggatggaaacgccttcaaaaccgcagc
cagcatcgcggcatgtcgcagccgtctgaagccaagaacatggtcatcgatctgaacgca
acctcgtctcacaccatcggcgaccgggtgtttcaccaaaaattcggatacggccacatc
accgggatcgaaggcgataagctggatatcgcattcaacaaagccggtgataaaaaggtc
gttgcgaagttcgtcacagcggcggccaccgccggggacgacgttccgttctaa

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