Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_09945
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Entry
GKR98_09945 CDS
T10172
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Pathway
bosg00521
Streptomycin biosynthesis
bosg00523
Polyketide sugar unit biosynthesis
bosg00525
Acarbose and validamycin biosynthesis
bosg00541
Biosynthesis of various nucleotide sugars
bosg01100
Metabolic pathways
bosg01110
Biosynthesis of secondary metabolites
bosg01250
Biosynthesis of nucleotide sugars
Module
bosg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GKR98_09945 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GKR98_09945 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GKR98_09945 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GKR98_09945 (rfbB)
00525 Acarbose and validamycin biosynthesis
GKR98_09945 (rfbB)
Enzymes [BR:
bosg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GKR98_09945 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Sacchrp_dh_NADP
NAD_binding_10
NmrA
Rossmann-like
Motif
Other DBs
NCBI-ProteinID:
QMU58484
UniProt:
A0A7D7VIZ2
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All DBs
Position
1975940..1976980
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AA seq
346 aa
AA seq
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MKILITGGAGFIGSAVVRKAIRDGHEVVNVDCLTYAANLQNVASVTNAPGYAFEQVSIAD
RPALAAVFDRHKPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYALLEATRSYWDQMNRP
EFFRFHHVSTDEVFGSLGAGGQFTETTPYDPRSPYSASKAASDHLVRAWHETYGLPIVLS
NCSNNYGPFHFPEKLVPVVILNALAGKDIPVYGDGGNVRDWLFVEDHADALLTVLTKGAV
GRSYNIGGEAEARNIDMVELICALLDKTRPKETLYRELITFVDDRPGHDRRYAIDPTRIR
DELGWRPSVTLEEGLARTVDWYLQNEDWWRPLLEDHDVSGRLGTSP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgataaccgggggcgcaggatttattggctctgctgttgtgcggaaagca
attcgcgacgggcatgaagtcgtcaatgtcgattgcctgacgtatgccgccaatctgcaa
aacgtcgcctcggtgaccaatgccccgggatacgcctttgaacaggtcagcattgccgac
cgccctgccctggccgctgtatttgaccgccataaacccgatgcggtgatgcatctggca
gccgaaagtcatgtggatcgatccattgatggcccggcagcctttatcgaaacgaatatc
gtcggcacctatgcattactggaggccacccgcagttattgggaccaaatgaaccgtccc
gaattctttcggtttcaccatgtttcgacggacgaggtgtttgggtcgttgggggccggt
ggacagttcacggaaaccaccccttatgatccgcgcagcccctattctgcgtcaaaggcg
gcttcggaccatttggtgcgcgcctggcacgagacatatggattgccaattgttctgtcg
aattgctcaaacaattacggaccgtttcatttccctgaaaaactggttccggtggttatt
ctgaacgcgttggcgggcaaggatattccagtttacggcgatggtggtaatgtgcgcgac
tggcttttcgtcgaagatcatgccgacgctttgctgacggtgctgaccaagggggcggtt
ggccgcagctataacattggtggcgaagctgaagcacgcaacattgatatggtcgagctg
atatgtgcgctgctggacaagactcgcccaaaggagacactttatcgcgaattaatcacg
tttgttgacgaccgtcccggtcatgaccgacgctatgcgattgatccaacacgtattcgc
gatgagcttggctggcggccttcggtaacgctggaagaaggattggcgcggacggttgat
tggtatcttcaaaacgaagattggtggcggccattgttggaagaccatgatgttagcgga
cggttgggaacttcgccgtga
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