Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_10560
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Entry
GKR98_10560 CDS
T10172
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Pathway
bosg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKR98_10560 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bosg03400
]
GKR98_10560 (uvrB)
DNA repair and recombination proteins [BR:
bosg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKR98_10560 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GKR98_10560 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
AAA_19
DUF87
Kinesin
Epimerase
AAA
eIF3_p135
AAA_16
IstB_IS21
Microtub_bd
Rhomboid_N
Motif
Other DBs
NCBI-ProteinID:
QMU58595
LinkDB
All DBs
Position
2105819..2108002
Genome browser
AA seq
727 aa
AA seq
DB search
MSDQMPLLNSPAPDVHTREKLEGGHALVMHTEFQPAGDQPTAIVELTQGVQDGEQNQVLL
GATGTGKTYTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSFYDYYQP
EAYVARSDTYIEKESQINDQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYGAMT
QDLHAGRNYDQRKVMADLIAQQYRRNDQAFQRGTFRVRGDSLEIWPAHLDSRGWRLSFFG
EELERIVEFDSLTGEKTGTMEKVRIYANSHYVTPKPTLKQAIESIKTELKQRLNQLVDEG
KLLEAQRLEQRTNFDVEMLEATGHCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFAD
ESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPQS
WELEQSGGVFTEQVIRPTGLLDPMVEIRPVEMQVDDLLDEVRKVTKDGMRTLVTTLTKRM
AEDLTEYMHEQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPECGLV
AILDADKEGFLRSETSLVQTIGRAARNADGRVIMYADRITGSMERALGETDRRRAKQIAY
NEEHGITPATVKKNVEDVLAGLYKGDTDMSRVTAKVDAPLVGANLQAHLDALRNDMRKAA
ENLEFEEAARLRDEVKRLETVDMVVSDDPLARQSAVDAAVEGVRKSSGRSTAGRAGQRGG
NVKRRGR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccagatgccccttctgaacagccctgcccccgacgtgcacacgcgcgaaaag
ctggaaggcggccacgcactggtcatgcatacagagtttcagccagccggtgaccaaccc
accgctattgtcgaactgacccaaggggtgcaggacggcgagcaaaatcaagtcctgctc
ggcgcaacaggcaccggcaaaacctatacaatggccaaggtcatcgaagaaacccaacgc
cccgccatcatcctggcccccaacaaaaccctcgctgcccagctttacggcgaattcaag
ggcttcttccctgaaaacgccgtcgaatatttcgtcagcttctatgattactaccagcct
gaggcctacgtcgcccgctcagacacctacatcgaaaaagaaagccagattaacgaccag
atcgaccggatgcgccactcggccacccgtgcgctactggaacgcgacgacgtgatcatc
gtcgcctcggtctcctgcatctacggcatcggctcggtcgaaacctacggcgcgatgacc
caagacctccacgcgggccgcaattacgaccaacgcaaggtcatggcagacctcatcgcc
caacaataccgccgcaacgatcaggccttccagcgtggcaccttccgcgtccgcggcgac
tcgctagaaatctggcccgcccacctcgatagtcgcggttggcgtcttagcttcttcggc
gaagaacttgaacgcattgtcgaatttgactctctgaccggcgagaaaaccggcaccatg
gaaaaggtccgcatctacgccaactcgcactacgtcacgccgaaaccgacccttaaacaa
gccatcgaaagcatcaagaccgagctgaaacagcgcctgaaccaactcgtcgacgaaggc
aaactgctcgaagcccagcgcctcgaacagcgcaccaacttcgacgtcgagatgttagag
gcgaccggccactgcaacggcatcgaaaactactcccgctatctcaccggccgcgccccc
ggcgaaccacccccgaccctgttcgaattcatccccgacaatgccattgtcttcgccgac
gaaagccacgtcagcgtcccccaaatcggcggtatgtataagggcgactaccggcgtaaa
ttcaccctggccgaacacggcttccgcctgccgtcctgcatggataaccgccccctgaag
ttcgaagaatgggacgccatgcgcccgcaatcggtcttcgtctcggccaccccgcaatcc
tgggagctggaacaatccggcggcgtcttcaccgaacaggtcatccgccccaccggcctt
ctggaccccatggtcgagatccgccccgttgaaatgcaagtcgatgaccttctggatgaa
gtccgcaaagtcaccaaagacggcatgcgcacccttgtaaccaccctgaccaaacgcatg
gccgaggatctgaccgaatacatgcacgaacagggcatcaaggtccgctacatgcattcc
gacatcgacacgctggaacgcatcgaaattctgcgcgacctgcgccttggcgctttcgac
gtcctgatcggcatcaacctcctgcgcgaaggcctcgacatccccgaatgcggtctggtc
gcgatcctcgacgcggataaagagggcttcctgcgctcagaaacctccctcgttcagacc
atcggccgcgccgcgcgcaacgccgacggccgcgtcatcatgtatgccgaccggatcacc
ggctcgatggagcgcgccttgggcgaaaccgaccgccgccgcgccaaacagatcgcctac
aacgaagaacacggcatcacccccgccacggttaagaaaaacgtcgaggatgtgctggcc
ggcctctacaaaggcgacaccgacatgagccgcgtcacggccaaagtcgacgcccccctg
gtcggagccaacctccaagcccacctggacgccctgcgaaacgacatgcgcaaagccgcc
gaaaacctggagttcgaggaggccgcaaggttgcgggatgaagtcaaacgcctggaaacc
gttgatatggtggtctcggatgatccattggcaaggcagtcagcggtggacgcagcggtc
gagggcgtgcggaagtcgagcggtcgctcaacggcaggtcgcgctggtcagagaggcggg
aatgtgaagcggcgggggcggtag
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