Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_13100
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Entry
GKR98_13100 CDS
T10172
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bosg03400
]
GKR98_13100
DNA repair and recombination proteins [BR:
bosg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
GKR98_13100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
UPF0547
SWI2_SNF2
Zn_ribbon_3
AAA_16
DZR
DZR_2
SLFN-g3_helicase
AAA_22
Zn_ribbon_DUF2089
Motif
Other DBs
NCBI-ProteinID:
QMU59044
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All DBs
Position
2595995..2597731
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AA seq
578 aa
AA seq
DB search
MLTLRPYQEAAISSIYDYFQTNKGNPLVVIPTAGGKSLVMASFIEGVLKAWPDQRILIVT
HVRELIAQNHAEMLGLWPEAPAGIYSAGLGKREAQARVLFAGIQSIHRRAHEIGHTDLVL
IDEAHLIPGNSSTMYRRFLDALQAINPALKVIGLTATPFRTGSGMLHEGKDALFTDIAYE
APVRELIDAGFLSPLISKQPATRLDVSKVGTLAGDFIARDLAAAVDQKATTRAAVSEIIT
HGKDRKSWLAFCSGVDHARHVAEEFARQGVTCRTIFGDTPKDARDAIIAAFKCGEIRALA
SMGVLTTGFNAPGVDLIALLRPTKSAGLYVQMVGRGTRLAPDKENCLVLDFAGNVRRHGP
IDLVRPKRPGDGGGGEAPTKVCPECDSIMAISATECPDCGYVFPAREVKIAPTAATLPVL
SPKVQWLPVQGVSYSRHDKRGGLPSLKVTYSCGLKSYNEWVCVEHQGYARQKALEWWRKR
APGCPMPRTVDDAIAQAGQLARPTAISVRPSGRFLEISGYRFDPCATSTPASAPSAAGNL
AGLVGSTPHSLSRTPGGTKAANTSVRAPARTSVTGGQV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccctgcgcccataccaagaggctgcgatctcttcgatctacgactatttccag
accaacaagggtaaccctctggtggtgatcccgacggctggcggcaagtcgctcgtcatg
gcgtcattcatcgaaggggtgctgaaggcttggcctgatcagcgcatcctgatcgtgacc
catgtgcgcgagctgatcgcccagaaccatgcggagatgcttgggctttggcctgaggca
cctgcgggcatctattcagcgggtctgggcaaacgcgaggcgcaggcccgcgtcctgttt
gctggcatccaatcaatccatcgccgcgcccatgagatcggccacaccgatctggtgttg
attgatgaggcccatctgatcccaggcaattccagcacgatgtacaggcgttttctggac
gcgctgcaggcgatcaatcctgcgcttaaggtgatcggactcacagccacaccgtttcgc
actggcagcggtatgctgcatgagggcaaggacgcactcttcactgacattgcctatgag
gcgccggtgcgagagctgattgacgcagggtttctgagcccactgatctcgaaacagcct
gccacgcggctggatgtctcaaaggtcggcacgcttgcgggtgacttcattgcccgcgat
ctggcagccgcggtcgatcagaaagcgacgacgcgggcagccgtgagcgagatcatcacc
catggaaaagaccgcaaatcctggctggccttttgctcgggcgtggatcatgcgcgtcat
gtggccgaagagtttgcgcgtcaaggcgtcacctgccgtacgatcttcggggacacaccc
aaggacgcgcgcgatgccatcatcgcggccttcaagtgcggcgaaatccgcgcgctggcc
tcaatgggcgtgctgacgaccgggttcaacgcgcctggcgtcgatcttatcgcattgctg
cgtcccaccaaatccgcagggctctatgtccagatggtgggtcgtggcacgcgtctggct
ccggacaaggaaaactgtctggttctcgactttgcgggcaatgtccgccgccacggaccg
atcgatctggtccgcccgaaacgcccgggcgatggcgggggtggcgaggcacccacaaag
gtctgccccgagtgcgacagcatcatggcgatctcggccaccgaatgcccggactgcggc
tatgtcttcccggcccgggaggtgaagatcgcccccacggcggccacgcttccggttttg
tcgccaaaagtccaatggctgccggtccaaggcgtgtcctatagccgtcatgacaagcgt
ggcgggctgccatcactgaaggtcacctatagctgcgggctcaagtcctacaacgaatgg
gtttgtgtcgagcatcaggggtatgcgcgccagaaggcgctcgaatggtggcgaaagcgc
gcgccgggctgcccgatgccgcgcactgtcgacgatgccattgcgcaggcggggcaactg
gcccggccaaccgcgatctcggtgcgcccgtctggccgctttcttgaaatctccggctac
aggtttgatccatgcgccacatcaactccggcctctgcgccgtctgccgccgggaacctc
gcgggtttggttggttcaaccccacattcgctgtctcggacccccggcgggaccaaagcc
gcaaacacctctgttcgcgcacctgccaggacatctgtcacaggaggacaggtatga
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