Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_14735
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Entry
GKR98_14735 CDS
T10172
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Pathway
bosg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKR98_14735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bosg03021
]
GKR98_14735
03019 Messenger RNA biogenesis [BR:
bosg03019
]
GKR98_14735
Transcription machinery [BR:
bosg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GKR98_14735
Messenger RNA biogenesis [BR:
bosg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GKR98_14735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
OB_RNB
AAA_25
NACHT
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QMU60116
LinkDB
All DBs
Position
2928734..2930023
Genome browser
AA seq
429 aa
AA seq
DB search
MCGQRILMSDRLNLSELKSKSPKELLAMAEDLEIENASTMRKGEMMFSILKERADEDWVI
GGEGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPEMIRKFSLRTGDTIEGVIREPNDNER
YFAMTQVESINFEEPEKARHKVSFDNLTPLYPDERLNMEIEDPTIKDRSARIIDLVAPVG
KGQRCLIVAPPRTGKTVLLQNIAHSVETNHPECYLIVLLIDERPEEVTDMQRSVKGEVVS
STFDEPATRHVAVSDMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGV
DANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKV
ADKRVYPAMDILKSGTRKEDLLVDKGDLAKTFVLRRILNPMGTTDAIEFLISKLKQTKTN
SDFFDSMNT
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggtcagaggatacttatgtctgatcgcctaaatctgtcggaactgaaatctaaa
tctccaaaagagctgcttgctatggcggaggatctagaaattgagaacgcatcaacgatg
cgcaagggcgagatgatgttctcgatccttaaagaacgggcagacgaagactgggtcatt
ggtggtgaaggggttctggaagtgctccaagacgggtttggttttcttcgttcgccagaa
gcgaactacttgcccggccccgatgatatctatgtctcacctgagatgatcaggaagttt
tctctgcgaaccggtgacaccatcgaaggggtaatccgggaaccaaacgacaacgagcgc
tattttgcgatgacgcaagttgaatcgattaattttgaggaaccagagaaggcgcgccac
aaagtcagctttgataacttgaccccgctctatccggacgaacgcctgaatatggagatc
gaggatccaacgatcaaagataggtcagctcggataattgatttggtagctcctgttggt
aaggggcagcggtgcctcattgttgctccccctcgaacaggtaagactgtgcttttgcaa
aatatcgctcactcggtggagaccaatcatccggagtgttatttgattgttctactgatt
gacgagcggcccgaggaagtcacagacatgcagcgctctgtgaagggtgaagttgtttca
tcgacgttcgatgaaccagcaacgcgtcacgtcgcggtttccgacatggtaatcgagaaa
gccaaacgtttggtggagcataagcgagacgtagtaatactgttggattcgataacgcga
cttggacgtgcgtttaacaccgtagttccgtcttctggaaaggtattgaccggtggtgtg
gacgcaaatgctttgcaaagaccgaagcgcttctttggtgcagcgcggaacatcgaagaa
ggaggctctcttacgattattgcaacagcattgattgacacaggaagccgcatggatgaa
gtcatttttgaagagtttaagggaacgggcaatagcgagatcgtactagatcgcaaagtc
gctgataaacgcgtctatcccgcaatggatattctgaaatcgggaactcggaaagaagat
ctactcgttgacaagggggacttagctaagacgtttgtattgcggcgtatcctcaaccct
atgggaacaaccgatgccattgagttcttgatttccaagctgaaacaaaccaaaacgaat
tcggatttcttcgactccatgaatacctaa
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