Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_14840
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Entry
GKR98_14840 CDS
T10172
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Pathway
bosg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKR98_14840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bosg03019
]
GKR98_14840
Enzymes [BR:
bosg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GKR98_14840
Messenger RNA biogenesis [BR:
bosg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GKR98_14840
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Gad2
Dsc3_C
Motif
Other DBs
NCBI-ProteinID:
QMU60121
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Position
2952350..2953516
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AA seq
388 aa
AA seq
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MQIEADWLRSESTQSVLRMLSKAGHQGLVVGGCVRNTILGLTTTDIDIATSARPETVLEL
AHSAGMKALPTGIEHGTVTVVHNDTPYEITTFREDIETDGRHAAVAFTDQLEKDASRRDL
TMNAIYADAEGHVLDPLEGLDDLLSRRIRLIGDPNQRIREDYLRSLRFFRFFAEYGDPAL
GFDSDALSAISSNLIGMAGLSAERIGGEFRKLLSAADPAPALAAMNSTGVLHSVLPGADA
MWIAPLVHLEATKNIAPDHIRRLTALGGTDVEKSLRLSRSESKLRGQLLSALSKGWSTME
LSWRMGAKNAWSVLLLKHAISGQEIPDCSSEEISLAANYHFPVTANDLMPKFKGRQLGAE
LRRLENTWIDSDFSMSRAELLETVRKEG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcagatagaagcggattggcttagatccgaatcgacacaaagtgttttgcggatgctt
tctaaagccgggcaccaggggttggtggttggtggttgtgttcggaataccattctaggt
ctgactacgacggacatcgacatagcgacttctgctcggcctgaaaccgttctggaactt
gcccattcagcagggatgaaagccttgccaacaggcattgaacacggaacggttaccgtt
gttcataacgacacaccttatgagatcacgacatttagagaagacatcgaaactgatggc
cgccacgcggctgtcgcattcacagatcaactggagaaagatgccagccgccgggaccta
acaatgaacgcaatttacgcggatgcggaaggtcatgttctggacccgctagaaggatta
gacgaccttctaagccgtcgtatccggcttatcggagatccgaaccaacggattcgcgaa
gattacttgcgaagtcttcgcttctttcggtttttcgctgagtatggagacccggcactt
ggatttgatagcgatgcgctttcggccatttcttccaatttaattggaatggcgggcctg
tcggcagagcgaattggcggagaatttcgcaaactcctatcggcggcagaccctgctccg
gcgttggcggccatgaactcaacaggagttctacactcggttcttcccggagctgacgca
atgtggattgccccactggtccacctagaagcaactaagaatattgcccctgaccatatt
cgtcgactgacggcattgggcggaacggatgtcgaaaaaagcctccggctatcacggtcg
gaatcaaaattacgtggtcaacttctgagcgctttgtccaagggttggtctaccatggaa
ctgtcttggagaatgggagcgaaaaacgcttggagtgttttgctcttgaagcacgcaata
tccggacaagaaatccccgattgcagctcagaagagatcagtcttgccgcaaactatcac
tttccagtgacggctaacgatttgatgccaaagttcaaaggccgccagcttggggctgaa
ttgagaagacttgaaaatacttggatcgacagcgacttttccatgtcgcgtgctgaactt
ctggaaaccgttcgcaaagagggatga
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