Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_16485
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Entry
GKR98_16485 CDS
T10172
Name
(GenBank) cyclic nucleotide-binding domain-containing protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Pathway
bosg02020
Two-component system
bosg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GKR98_16485
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GKR98_16485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bosg03000
]
GKR98_16485
Transcription factors [BR:
bosg03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
GKR98_16485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
Crp
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
QMU59636
LinkDB
All DBs
Position
3288509..3289204
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AA seq
231 aa
AA seq
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MNIRNIKDIMQDSVLAASMDLADCRALFADARRRTFDPGQMIFAEGEPGNMVMLIETGRV
EVSVTSASGRKSVLAHMGPSELLGEIAALDGGARSADAIAAGTVSGLVLSRQNLLAFVAE
RPNVAQAIITELCRKVRNASDMFATQSVTEGGPRLARALLQLFDRWGETGPDGVEHLKER
FSQGEIGEFSGLARENVNRHIKTWVKQGYLRSESRQLVLSDREALEDMIGN
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcgaaatatcaaagatatcatgcaagacagtgttctggctgcgtcgatggat
ctagccgactgtcgggcgctgtttgctgatgcgcggcgaagaacatttgatcctggccag
atgatttttgctgaaggtgaacctggaaacatggtcatgttgatcgagaccggtcgggtt
gaggtttctgtgacatcggcgtctggccgcaagtcagttcttgcacatatgggtcccagt
gaacttttgggcgagatcgctgctttggatggcggagcacgcagtgcagatgctatcgcg
gctggtaccgtctccgggcttgtattatcccgccagaacctgctcgcatttgtggcagag
cggccgaatgtggcccaggcaattatcaccgagctttgccggaaagttcgcaatgcttca
gatatgtttgccacccaatccgttacggaaggcgggccgcgattggcgcgcgcacttttg
caattatttgatcggtggggcgaaactggaccggacggggtagaacacttgaaagaacgt
ttctcgcagggagagattggtgaattcagcggtttggccagagagaatgtgaatcgacac
atcaagacctgggtgaagcaggggtatctacgttcggaaagtcgccaattggtattgtcg
gatcgtgaggcactggaagacatgatcggcaactga
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