Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_16775
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Entry
GKR98_16775 CDS
T10172
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Pathway
bosg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GKR98_16775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bosg03400
]
GKR98_16775
Enzymes [BR:
bosg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GKR98_16775
DNA repair and recombination proteins [BR:
bosg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GKR98_16775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QMU59686
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All DBs
Position
3351149..3352642
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AA seq
497 aa
AA seq
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MDLFEDTAGDNAPEFTVSEISSAVKKVIEGEFGRIRVRGEVGRVFKARSGHLYYDVKDDR
NVLGCTTWKGQISGLSVVPEEGLEVVVTGKLSAFGAQSKYNMNVDEMAVAGEGALMAMLE
KRKKKLEAEGLFDPARKRKLPYLPEIIGVVTSPQGAVIRDILHRLRERFPRKVLVWPVAV
QGERSAPEVAAAIRGFNALTPGGALPRPDLLIVARGGGSIEDLWGFNEEIVARAAAESAI
PLISAVGHETDTTLIDFVSDHRAPTPTAAAELAVPVRLDLLVWVDGQDARLSRAVSQGVQ
RRRERLRDLARVLPKAEALLFDPRQRLDRMDDALPRALQRMVERKSSELTRLSGAIRPAA
LRNRLAAERLRLETLSGRLTPALSRVVSLNGERVKRQREALTVLAPRLNSAMAQGLKSKG
DRVEALERVRRSVGYVETLKRGYAVVRDGEAIVTSATQAGSAAALELEFRDGRVRIGDQS
KKPAQKSTKPPEQGTLL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggacctgttcgaagacaccgccggcgacaacgcgccagaattcaccgtttcggagatt
tccagcgccgtgaagaaggtgatcgagggcgagtttggccgcatccgcgtgcgcggtgaa
gtcggacgcgtgttcaaagctcgctcggggcacttgtattatgacgtcaaggacgaccgg
aacgtacttggctgcaccacatggaagggccagatttcgggcctcagcgtggtgccggaa
gaaggcctggaagttgtcgtcaccggcaagctctcggccttcggcgcgcagtcgaaatat
aacatgaacgtcgatgaaatggccgtggcgggcgagggcgcgctgatggccatgctggaa
aagcgcaaaaaaaagcttgaggccgaagggctttttgaccccgcccgcaaacgaaaatta
ccctatctgcctgagattattggcgtcgtcacatcgccgcagggtgccgttattcgcgat
atcctgcaccggctgcgcgagcggtttccgcgtaaagttctggtctggccggttgctgtt
cagggtgagcgcagcgcacccgaagttgccgctgcgatccgggggtttaacgcgctgacc
cccggcggagccctgccacgcccggatttgctgatcgtcgcgcgcggcggcggatcgatc
gaggacctttggggtttcaacgaagaaatcgtcgcgcgcgctgccgctgaaagtgcgatc
cctctaatttcggcggtcggccacgaaacagatacgacgctgattgattttgtctcggac
caccgtgcgccgactccgactgctgccgcagaattggcagtgcccgttcgtctggacctg
ctggtgtgggtggacggacaggatgcccgccttagccgggctgtgtcccaaggcgttcag
cgacgacgcgaacgcctgcgtgacctggcccgggttctgccgaaggccgaagcgttgctg
tttgatccacgccagcgactggatcgaatggatgacgccctgccgcgcgctcttcagcgg
atggttgaacgaaaatccagtgaacttacgaggctttccggcgcaatccgcccggcggca
ttgcgcaatcgcttggccgcagagcgtctgcggttggaaacactgtcgggtcgcttgacc
ccggctttgtcgcgggtcgtgtcattgaacggcgagcgcgtcaaacgccagcgcgaggcg
cttacggtgctggccccgcgtttgaacagcgcgatggcgcaagggttgaagtccaaaggc
gatcgtgtcgaggcgttggaacgtgtgcgccgcagtgtcggttacgtcgagacattgaag
cgcggatatgcggttgtgcgcgatggtgaagcgattgtgacttcggcaacacaggctgga
tcagcggccgcgttggaactggaattcagggatggtcgcgtcaggatcggtgatcagtcg
aaaaaacccgcgcagaaatcgacaaaaccacccgagcagggaacacttctttag
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