KEGG   Bradyrhizobium ottawaense: CIT37_08480
Entry
CIT37_08480       CDS       T05524                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bot  Bradyrhizobium ottawaense
Pathway
bot03030  DNA replication
bot03410  Base excision repair
bot03420  Nucleotide excision repair
bot03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CIT37_08480 (polA)
   03410 Base excision repair
    CIT37_08480 (polA)
   03420 Nucleotide excision repair
    CIT37_08480 (polA)
   03440 Homologous recombination
    CIT37_08480 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bot03032]
    CIT37_08480 (polA)
   03400 DNA repair and recombination proteins [BR:bot03400]
    CIT37_08480 (polA)
Enzymes [BR:bot01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CIT37_08480 (polA)
DNA replication proteins [BR:bot03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CIT37_08480 (polA)
DNA repair and recombination proteins [BR:bot03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CIT37_08480 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CIT37_08480 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1
Other DBs
NCBI-ProteinID: AWL92234
UniProt: A0A2U8P4D1
LinkDB
Position
8230330..8233377
AA seq 1015 aa
MPKTSPKTSAKADPPTAATAAAKPVAAKAAGKGDHIFLVDGSGYIFRAYHALPPLNRKSD
GLQVNAVLGFCNMLWKLLRDMPEDNRPTHLAIIFDKSEVTFRNKIYPEYKAHRAPAPDDL
IPQFALIREAVRAFDLPCLEQVGFEADDLIATYVRQACERGASATIVSSDKDLMQLVTDC
VTMYDTMKDRRIGIPEVIEKFGVPPNKVVEVQALAGDSTDNVPGVPGIGIKTAAQLITEY
GDLDQLLFRAGEIKQPKRREALLENAEKARISRQLVLLDDKVDLDVPLDDLAVHEPDARK
LIAFLKAMEFTTLTRRVAEYSQIDPANVDADPGYASGASVFTTLPPSDVVPAPGGDTSAQ
ARAKEPNKSAGKEDKAASPKGAPISLAAAREEALRKLPVDRAKYQTIKSLEELNAFIARI
HDTGHVAVEIRGNSIDPMQADFCGIALALAPNEACYVPLAHKQAGGGAGLFDAGLAPDQV
KHADAIEALRPVLESAGILKIGFDLKFTAVMLAQHGITLRNTDDAQLISYVLDAGRGSHA
IESLSERWFGHAMLKENELLGSGKGKITFDQVPIDKAAALSAEGADVALRAWRVLKPRLV
AEHMTAVYETLERPLVAVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEIQEIAGEPV
NVGSPKQIGDILFGKMGLSGGTKTKTGAWSTTAQVLDELAEQGHDFPKKILEWRQVSKLK
STYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRRAFIATP
GHKLVSADYSQIELRLLAEIADIPVLKQAFRDGLDIHAMTASEMFGVPIKGMPSEIRRRA
KAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETRDFCRQNGYVTT
LFGRKCHYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMTRVEDALAEKKLSAQML
LQVHDELIFEVPDAEVEATLPVVQHVMQDAPFPAVLLSVPLHVDARAANNWDEAH
NT seq 3048 nt   +upstreamnt  +downstreamnt
atgccaaagacctccccgaagacctccgccaaagccgatccccccactgccgcgacagct
gctgccaaaccggttgcagcaaaggcggccggcaagggcgaccacatcttcctggtcgac
ggttccggctacatcttccgcgcctaccacgcgctgccgccgctgaaccgcaagtctgac
ggcctgcaggtcaacgccgtgctcggtttctgcaacatgctgtggaagctgctccgcgac
atgccggaagacaaccggccgacgcacctcgcgatcatcttcgacaagtcggaggtcacg
ttccgcaacaagatctacccggagtacaaggcccaccgggcgccggcgcctgacgatctc
atcccgcaatttgcgctgatccgcgaggcggtccgcgccttcgacctgccctgcctggaa
caagtgggcttcgaggccgacgacctgatcgcaacctatgtgcggcaggcctgcgagcgc
ggcgccagcgcgaccatcgtgtcctccgacaaggatttgatgcagctcgtcaccgattgc
gtcaccatgtacgacaccatgaaggatcgccgcatcggcatcccagaggtgatcgagaaa
ttcggcgtgccgccgaacaaggtcgtcgaggtacaggctctggccggcgattccaccgac
aacgtgcccggcgtgcccggcatcggcatcaagaccgcggcgcagctgatcaccgaatat
ggcgacctcgatcaactgttgttccgcgccggcgagatcaagcagcccaagcggcgcgag
gcgctgctcgagaatgccgagaaagcgcggatctcgcggcagctcgtgctactcgacgac
aaggtcgacctcgatgtgccgctggacgacctcgcggtccacgagcccgacgcacgcaag
ctgatcgccttcctgaaagccatggaattcacgacgctgacgcgacgcgtcgccgaatat
tcgcaaatcgatcccgccaatgtcgatgccgaccctggctatgccagcggcgccagcgtg
ttcacgacgctgccgccctccgatgtcgtgcctgcgccgggcggcgatacgtcggcgcaa
gcccgggcgaaagagcccaacaagtcagcgggcaaggaggacaaggctgcgagcccgaag
ggcgcgccgatctcgctggccgccgcgcgcgaagaggcgctgcgcaagcttccagtcgat
cgcgccaaatatcaaacgatcaagtcgctcgaggagctcaacgccttcatcgcccgcatc
cacgataccggtcatgtcgcggtcgagatccgcggaaactcgatcgacccgatgcaggcc
gatttctgcggcatcgcgctggcgctggcgccgaacgaggcctgctatgtgccgctggcg
cacaagcaagctggcggcggggccggcctgttcgacgccggccttgcacctgatcaggtc
aagcatgccgatgcgatcgaggccctgcggccggtgctggaatcggcgggcattctcaag
atcggcttcgatctcaaattcaccgccgtcatgctggcgcagcacggcatcaccttgcgc
aacaccgacgatgcgcagttgatctcctacgtgctcgatgccggccgcgggtcgcacgcg
atcgaatcgctgtccgagcgctggttcggacacgccatgctgaaggagaacgagctgctc
ggcagcggcaagggcaagatcaccttcgaccaggtgccgatcgacaaggccgcggcactg
tcggcggaaggcgccgacgtcgccttgcgcgcctggcgcgtgctgaagccgcgcctggtc
gccgagcatatgaccgcggtctacgagacgctggagcggccgctggttgcggtgcttgcg
cgcatggagcggcgcggcatctcgatcgaccgccaggtgctgtcgcgcctgtccggcgac
ttcgcccagaccgcggcccgcgtcgaggccgagatccaggagatcgcgggcgagccggtc
aatgtcggcagccccaagcagatcggcgacatcctgttcggcaagatgggactgtccggc
ggcaccaagaccaagaccggcgcctggtcgaccaccgcgcaggtgctcgacgagctcgcc
gagcagggccatgacttcccgaagaagatcctggagtggcgccaggtctcgaagctgaaa
tcgacctacaccgacgctctgccgacctacgtcaatccgcagacccatcgcgtgcacacg
acctacgcgctggccgcgaccacgacgggccggttgtcgtcgaacgagccgaatttgcag
aacatcccggtgcgcaccgaggacggcagaaaaatccgccgcgccttcatcgcaacaccc
ggacacaagctcgtctccgcggactattcgcagatcgagctcaggctgctggcggagatc
gccgacattcccgtgctgaagcaggcgttccgcgacggtctcgacattcacgccatgacg
gcgtcggaaatgttcggcgtgccgatcaagggcatgccgagcgaaatccgccgccgcgcc
aaggcgatcaatttcggcatcatctacggcatctccgcgttcggcctcgccaaccagctc
ggcatcgcccgcgaggaggcctcggcctacatcaagaaatatttcgagcgcttccccggc
atccgcgcctacatggacgagacgcgcgatttctgccggcagaatggctatgtcaccacg
ctgttcggccgcaaatgccactaccccgacatcaaggcctccaacgcctcggtgcgtgcc
ttcaacgagcgcgccgcgatcaacgcgcggctccagggcaccgcggccgacatcatccgc
cgcgccatgacgcgggtggaggatgccctcgccgagaagaagctgtcggcgcaaatgctg
ctgcaggtgcacgacgaattgatcttcgaggtgcccgacgccgaggtcgaggcgacgctc
cccgtcgtgcagcacgtgatgcaggacgcaccgttcccggccgtgctgctgtcggtgccg
ctgcatgtcgatgcgcgcgcggcgaacaactgggacgaggcgcattga

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