Bradyrhizobium ottawaense: CIT37_10350
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Entry
CIT37_10350 CDS
T05524
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIT37_10350 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bot03019
]
CIT37_10350 (pnp)
03016 Transfer RNA biogenesis [BR:
bot03016
]
CIT37_10350 (pnp)
Enzymes [BR:
bot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CIT37_10350 (pnp)
Messenger RNA biogenesis [BR:
bot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CIT37_10350 (pnp)
Transfer RNA biogenesis [BR:
bot03016
]
Prokaryotic type
tRNA degradation factors
CIT37_10350 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AWL92565
UniProt:
A0A2U8P4B1
LinkDB
All DBs
Position
57109..59265
Genome browser
AA seq
718 aa
AA seq
DB search
MFNKHSVEIDWGGRTLKLETGKIARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVALVASSAALTLSGAPFKGPIGAARVGFANDEFILNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTVIDNSA
LEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKVIAHYFPEGQEPKYDKLRIAGVFKE
LEAKIVRWNILDTGKRIDGRDSKTVRNIVAEVGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTTRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTEQGITSLQMDIKIEGITEEIMKVALAQAKDGRIHILGEMAK
ALTNARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASDPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLASARV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEGKGGEGEKAPREAAGE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcattcggtcgagatcgactggggcggacgcactctcaagctggaaacc
ggcaagatcgcccgtcaggccgacggcgccgtcgtcgccacctatggcgagaccgtggtg
ctcgccaccgtcgtcgcggccaaggcgccgcgcgaaggcgtcgacttcctgccgctgacc
gtcgactaccaggagaagacctacgctgcgggccgcattcccggcggctatttcaagcgc
gaaggacgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgtccgatccgt
ccgctgttcgtcgacggctggcgcaacgagacccaggtgatcgtcaccgtgctctcgcac
gacatggaaaacgatcctgatatcgtcgcgctggtggcttcgtccgctgcgctgacgctg
tccggcgcgcccttcaagggcccgatcggcgcggcacgcgtcggcttcgccaatgacgag
ttcatcctcaacccgacgctcgacgagatggtcgacacccagctcgacctggtcgtcgcc
ggcaccgccgacgccgtgctgatggtcgaatcggaagccaaggagctgaacgaagacatc
atgctcggcgcggtgatgttcggtcaccgccacttccagccggtgatcaacgcgatcatc
gagctcgccgagaaggctgcgaaggagccgcgcgaagtcaccgtgatcgacaattcggcg
ctcgagaaggaaatgctcggcctcgtcgagcaggagctgcgcgccgcctacgccattccg
gtcaagcaggatcgctacgccgcggtcggcaaggtcaaggaaaaggtgatcgcccactac
ttcccggaagggcaggagccgaaatacgacaagctgcgcatcgccggcgtgttcaaggag
ctcgaagccaagatcgttcgctggaacatcctcgacaccggcaagcgcatcgacggccgc
gacagcaagaccgtccgcaacatcgtcgccgaagtcggcgtgctgccccgcgcccacggc
tcggcgctgttcacccgcggcgagacccaggcgatggtcgtgaccacgctcggcaccggc
gaggacgagcagtacatcgacgcgctgtcgggaacgtacaaagagacgttcctgctgcac
tacaacttccctccctactcggtcggtgagaccggccgcctcggcggcaccaagcgtcgc
gagatcggccacggcaagctggcctggcgcgcgatccacccggtcttgccgccacatcac
gaattcccctacaccacgcgcgtggtgtcggagatcaccgagtcgaacggctcgtcctca
atggcttcggtctgcggcgcttcgctggcgctgatggatgccggcgtgccgttgaagcgg
ccgaccgcgggcatcgcgatgggcctgatcctcgaagacaagcgctttgcggttctctcg
gacatcctcggtgacgaggaccatctcggcgacatggacttcaaggtcgccggtaccgag
cagggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaagagatcatg
aaggtcgcgctcgcccaagccaaggatggacgtatccacatcctcggcgagatggccaag
gcgctcaccaacgcccgtgccgagctcggcgaatacgcgccgcgcatcgagaccttcaag
atcgccaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaatatcgaggacgacggcaccgtgaaggtcgcctcc
agcgacggcgaggccatgaaggccgcgatcaagtggatcaagtcgatcgcctccgatccg
gaagtcggccagatctatgacggcaccgtcgtcaaggtgatggagttcggcgccttcgta
aacttcttcggctccaaggacggcctcgtccacatcagccagctcgcctcggcgcgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgaccgcggcaagacccgcctgtcgatgaaggtggtcgatcagaccaccggcgaagac
ctcgaaggcaagggcggcgagggcgagaaggccccgcgcgaagccgccggcgagtaa
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integrated database retrieval system
