Bradyrhizobium ottawaense: CIT37_11550
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Entry
CIT37_11550 CDS
T05524
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bot
Bradyrhizobium ottawaense
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bot03032
]
CIT37_11550
03400 DNA repair and recombination proteins [BR:
bot03400
]
CIT37_11550
Enzymes [BR:
bot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CIT37_11550
DNA replication proteins [BR:
bot03032
]
Prokaryotic type
DNA Topoisomerases
CIT37_11550
DNA repair and recombination proteins [BR:
bot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIT37_11550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AWL92771
UniProt:
A0A2U8P4W1
LinkDB
All DBs
Position
303659..304828
Genome browser
AA seq
389 aa
AA seq
DB search
MMDQQNLGTIRPASADPAAIALAKALGQWPKPAAFRRPSPKKAFDTAPAATVEALAKELG
LRLGDQNELTIRRIRRGKGYSFVRPNGAHIRDARTIRRLHAMAVPPAYREVRYSADPSLH
LQAVGRDAAGRLQYRYHADWEKVREHRKAHRLEKLVGALPKIRRKVSAFLSGDEPTREFA
LSAVIELIARTAIRPGNESYARLNGTRGATTLLKSNVTLEDDSFVLTFKAKGGKAVRKEC
DAAKLVRAIGILQGVPGKRMFQYRDAYGIVRAVNTTQVNAFLREIAGIKISLKDFRTLMA
SAVVVESLSRITPATSQRGRKKQVLDAIRAAADKLSNTPAICRKSYVHDTIVTAFEDGIL
ERFAATMKGQRSQARREQLLAQVVATAAV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaatctcgggacgatacggcccgcttcagccgatcctgcggccatt
gcattggccaaagccctcggacaatggccgaaacccgccgctttcaggcgtcctagcccg
aagaaggccttcgacacggcgcccgcggcgacggtcgaagcgctcgccaaggagctcggc
ctgcggctcggcgaccagaacgagctgaccatccgccgcatccggcgcggcaagggctat
tccttcgtgcgtcccaatggcgcacatatccgcgacgcccgcactatccgccggctgcac
gccatggcggtgccgccggcctatcgcgaggtgcgctactccgccgatccgagcttgcat
ctccaggccgtgggccgcgatgccgcaggccggctgcaatatcgctatcacgccgattgg
gagaaggtccgcgagcaccgcaaggcgcatcgtctggaaaagctcgtcggcgcgctgcca
aagatccggcgcaaggtctcggcgttcctgtcgggcgacgagccgacgcgtgaattcgcg
ctctcggccgtgatcgagctgatcgcgcgcactgcgatccgtcccggcaatgaatcctat
gcccgcctcaacggcacccgcggcgccaccacgctgctgaagtcgaacgtcacgcttgag
gacgacagcttcgtgctgaccttcaaggcgaagggcggcaaggcggtgcgcaaggagtgc
gatgcggccaagctggtgcgcgccatcggcattttgcagggcgtccccggcaagcgcatg
ttccagtatcgcgatgcctacggcatcgtgcgcgcggtcaacaccacgcaggtgaacgcg
ttcttgcgcgagatcgccggcatcaagatttcgctgaaggatttccgtacgctgatggcg
tctgccgtcgtcgtggaatcgctgtcgcgaatcacgccggcgaccagccagcgcggccgc
aagaagcaggtgctggacgcgattcgcgccgcagccgacaagctctccaacacgccggcg
atctgccgcaagagctacgtccacgacaccatcgtcaccgcgttcgaggacggcatcctc
gagcgcttcgccgcgaccatgaagggccagcgctcgcaggcgaggcgcgagcagcttctg
gcgcaggtggtggcgacagccgcggtgtaa
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