Bradyrhizobium ottawaense: CIT37_12055
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Entry
CIT37_12055 CDS
T05524
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot00300
Lysine biosynthesis
bot00470
D-Amino acid metabolism
bot01100
Metabolic pathways
bot01110
Biosynthesis of secondary metabolites
bot01120
Microbial metabolism in diverse environments
bot01230
Biosynthesis of amino acids
Module
bot_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CIT37_12055 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CIT37_12055 (dapF)
Enzymes [BR:
bot01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CIT37_12055 (dapF)
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
DUF2924
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AWL92864
UniProt:
A0A2U8P635
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All DBs
Position
404901..405776
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AA seq
291 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDMRDSAAKVTSDDARAVASANGGVAYDQLMVLQKPRLD
GTEAFIRIYNSDGSEAGACGNGMRCVVRRIFEKNGQTAATFETAAGLLNAWQGPAPDLYT
VDMGAPKFGWQDIPLAEEFRDTRYIELQIGPIDNPILHSPSVLSMGNPHAIFWVDDVDAY
DLERFGPLLENHPIFPERANITLAHIVDDKHITIRTWERGAGLTRACGSAACATAVGAAR
LKRAERKVEITLPGGKLGIEWRERDDHVLMTGTATFEYEGRFDPALFAPAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggccaaccacgcatttgccaagatgaacggcatcggcaacgagatcgtc
gttgtcgacatgcgcgattccgcagcaaaggtgacgtcggacgacgcccgcgcggtggcg
tccgcgaacggtggcgtggcctacgaccagctcatggtgctgcagaagccgcggctcgac
ggcaccgaagccttcatccgcatctacaacagcgatggctccgaggccggtgcctgcggc
aacggcatgcgctgtgtggtgcggcgcatcttcgagaagaacgggcagaccgccgcgacg
ttcgagacggcggccggcttgctcaatgcctggcagggcccggcgcccgatctctacacc
gtcgatatgggcgcgccgaagttcggctggcaggacattccgctggcggaagagttccgc
gatacccgctacatcgaattgcagatcgggccgatcgacaatccgatcctgcattcgccc
tccgtgttgagcatgggcaatccgcatgcgattttctgggtcgacgacgtcgacgcctat
gatctcgagcgtttcggtccgctgctcgaaaaccacccgatcttcccggagcgcgccaac
atcacgctcgcccatatcgtcgatgacaagcacatcacgatccgcacctgggagcgcggt
gccggcctgaccagggcctgcggctcggcggcctgcgccacggccgtcggtgcggcccgc
ctgaagcgggccgagcgcaaggtcgagatcacgctgcccggcggcaagctcggcatcgaa
tggcgcgaacgcgacgatcacgtgctgatgacgggcacggcgaccttcgaatatgagggc
agattcgatccggcgctgtttgcgccggccgcctga
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