Bradyrhizobium ottawaense: CIT37_12490
Help
Entry
CIT37_12490 CDS
T05524
Name
(GenBank) PAS domain S-box protein
Organism
bot
Bradyrhizobium ottawaense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_3
HATPase_c
PAS_8
Response_reg
HK_sensor_dom_bact
HAMP
dCache_1
HisKA
Diguanyl_cycl_sensor
PAS_11
HPTransfase
MEKHLA
Motif
Other DBs
NCBI-ProteinID:
AWL92941
UniProt:
A0A2U8P5D9
LinkDB
All DBs
Position
complement(494580..498173)
Genome browser
AA seq
1197 aa
AA seq
DB search
MSAPATDDGGAAAPGQTRRGHPGSPANIRLTLATRLAIAMILLVAVTVAAVGWLGFRNTT
QAVIPRVLERVEAQSRLLAANLESYVAGVRGDLIGYRSAAAINGLIRARLGGGVDPLDGV
TEQTWRDRIATRLAAEIEAKPSYGQFRIIGLDDDQRELVRVDRSGPHGAARIVPNSELER
KGDRAYFQDTMRLAPGEIYVSPIDLATRQGGTTVLHTPTLRVATPLFTPNGKPFGIIIAN
IDMRPALDRIRSTASSGGEIYVVNSHGDYLVHPDRAREFASLQGRPTNWRDDFPFFSAMA
GTSDLSTRLMTDASGRPTGAAIAPALLAGKEWTAIIVTIPPSVFGRVPAAIQKTSVLVGV
LAVLAAAALAVLLARSLTRPIGRLTAAVEAIGRGRQADIPVDASGETGVLARAFAQMVEE
TRAKTAALEREIREHRRTEAARSHHAAREQLFSAAVESSDDAIVMQTLDAIITGWNPAAE
RLYGYSASEAIGKSTAIIVPPDRREHGKDYLARIARGESIERFETVRLRKDGTPVEISLS
LSPIRGPSGEIIGVSGTAHSLTEARRAERQLQQQLEERRQIFDTSQDLIMVMDPRGHVAQ
ISPSSETILGYRPDEMIGRSGADFIHPDHLAQSREDMRALRRGERPKLGDTRCFHKNGHE
VWLSWLGNWSEQAQRFFFVGRDMTEARLAQESLRESERLARNIVETSLDAFIQTDETSSI
LNWNSQAEQLFGWRRDEVLGKSTIDLIVAESERERVRAGLKQFLKNEDGRTLNRRRELMC
CRRDGKEFKAELSVTALKRREGLLFNVFYRDLTDKIAAEERIRHAEKMEAVGQLTGGVAH
DFNNILTVITGTIEILAEAVEKEPQLAAITKMIDEAAARGADLTQHLLAFARKQPLQPRE
IDINSLVVDTAKLLRPTLGEQIQIESVFEDENCVAIVDPNQLTTAILNLALNARDAMPGG
GKLIVETGAAYLDEVYASGNDVRPGHYVLIAVSDTGTGIPANMLPRVFDPFFTSKGPGKG
TGLGLSMVYGFIKQSAGHIKIYSEEGHGTTIKMYLPPGKTPTAIGEGVTPATIEGGHETI
LVVEDDRLVRDYVLAQLHALGYVTLQAANAAEALAIVAAGRPFDLLFTDVIMPGKMNGRQ
LADELMKTRPDLRVVYTSGYTENAIIHHGRLDSGVLLLAKPYRKSDLARIIRKALSG
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccggccaccgatgacgggggcgccgctgctccaggccagaccaggcgcggt
catccgggaagccctgcgaacatccgcttgaccctcgcaacgcggctggcgatcgcgatg
atcctgctggtggcggtcaccgtggccgcagtcggatggctcggctttcgcaacaccacg
caagcggtcattccgcgcgtcctggagcgggtcgaggcccagtcacgcctgctcgcggcc
aacctggaatcctatgttgccggagtccgcggcgatttgatcggctatcgctctgccgcg
gccatcaacggcctgatccgcgcccgtctcggcggaggagttgacccccttgacggcgtt
acagagcagacctggcgcgaccgcatcgcgacgcggctcgcagccgagatcgaggccaag
cccagctacgggcagtttcgcatcatcggtctcgacgacgaccagcgcgagctggtccgc
gtcgaccgctccggcccgcatggagcggcgcggatcgtccccaacagcgagctggagcgc
aagggcgaccgagcctactttcaggacacgatgaggctggcgccgggcgagatttacgtg
tcgccgatcgatctcgcgacccgccaggggggcaccacggtcttgcacactccgacgctg
cgggtcgctacgccgctgttcacgccgaatggcaagccgttcgggatcatcatcgccaat
atcgacatgcgtccggccctcgaccgcatccgctcgacggcgagctcgggtggcgagatc
tacgtcgtgaattcgcacggcgattatctcgttcatcccgatcgcgcgcgggaattcgcc
tcattgcagggccgccccaccaactggcgcgatgattttccattcttctcggccatggcc
ggcacgtcggacctatccacgcggctcatgaccgacgcgtcgggccggccgaccggcgcg
gcgatcgcgccggcgctgctggcgggcaaggaatggaccgcaatcatcgtgaccattccc
ccgtccgtcttcggccgggtgccggccgccattcaaaagacgtccgtgctggtcggcgtg
ctcgccgtcctcgccgcagcggcgctcgcggtgctgctggcgcgctcattgacccgcccg
atcggccgcctgaccgcggccgtggaggcgatcggccgcggacggcaggcggacatcccc
gtcgatgccagcggcgagacgggcgtgctggcgcgggctttcgcccagatggtcgaagag
acgcgggcgaagacagccgctctcgagcgcgagatccgggagcatcgccgcaccgaggcc
gcacgaagccatcatgcggcacgcgagcagttgttcagcgccgccgtcgaatcgtccgac
gatgcgatcgtgatgcagacgctcgacgccatcatcacgggctggaatccggccgccgag
cggctctatggctattcggcgagtgaagcgatcgggaaatccactgcgatcatcgtgccg
cccgaccggcgcgagcatggcaaggactatctggcgcggatcgcgcggggcgagtcgatc
gagcggttcgagacggtgcgcctgcgcaaggacggcacgccggtcgagatctcactcagc
ctctcgccgatcagggggccgtccggcgagatcatcggcgtctccgggaccgcgcatagt
ctcaccgaggcgcggcgggccgagcggcagctgcagcagcagctcgaagagcgccgacag
atcttcgatacctcgcaggatctgatcatggtcatggacccgcggggccatgtcgcgcag
atcagcccgagcagcgagaccattctcggctaccggccggacgagatgatcggccgcagc
ggcgcggacttcattcatcccgaccatctggcgcaatcgcgcgaggacatgcgcgcgctg
cggcgcggcgagcgccccaagctcggcgacacccgctgtttccacaagaacggacacgag
gtctggctgtcctggctcggcaattggtccgagcaggcgcagcgcttcttcttcgtcgga
cgcgacatgacggaagcgcggctcgcgcaggaatcgctgcgcgagagcgagcgactcgcc
cgaaacatcgtcgagacctcgctcgacgccttcatccagaccgacgagaccagcagcatc
ctgaactggaattcgcaggccgagcagctgttcggctggcgccgcgacgaggtgctcggc
aagagcacgatcgacctgatcgtcgccgagagcgaacgcgagagggtcagggccggcctg
aagcaattcctgaagaacgaggacggcaggacgctgaaccgccgccgcgagctgatgtgc
tgccgccgcgacggcaaggaattcaaggccgagctgagcgtcaccgcgctgaagcgccgc
gaaggcctgctgttcaacgtcttttaccgcgacctcaccgacaagatcgccgccgaggag
cgcatccgccatgccgagaagatggaggcggtcggccagctcaccggcggcgtggcgcac
gatttcaacaacatcctcaccgtcatcaccgggacgatcgagattctcgcggaggccgtc
gaaaaggagccgcagcttgcggccatcacgaagatgatcgacgaggccgccgcgcgcggc
gccgatctgacccagcacctgctcgccttcgcgcgcaagcagccgctccagccgcgcgag
atcgacatcaactcgctggtggtcgacaccgcgaagctgttgaggccgacgctgggcgag
cagatccagatcgaatcggtgttcgaggacgagaattgcgtcgcgatcgtcgatcccaac
cagctcaccaccgcgatcctcaatctcgcgctcaatgcccgcgacgccatgcccggcggc
ggcaagctgatcgtggagaccggcgccgcctatctcgacgaggtctatgccagcggcaac
gacgtccgtcccggccattacgtgctgatcgccgtgagcgacaccggcaccgggatccct
gcgaacatgctgcccagggtgttcgatcccttcttcacctcgaagggaccgggcaagggc
accggactcgggctgtcgatggtctatggcttcatcaagcagtccgcaggccacatcaag
atctacagcgaggaaggccacggcaccacgatcaagatgtacctgccgcccggcaagacg
ccgacggccatcggcgagggcgtgacgcctgcgacgatcgagggcggacacgagacgatc
ctggtggtcgaggacgaccggctggtgcgcgactacgtgctggcgcagctgcatgcgctg
ggttacgtcaccttgcaggccgcgaacgcggcggaggcgctcgcgatcgttgccgccggc
aggccgttcgacctgctgttcaccgacgtcatcatgcccggcaagatgaacggacggcag
ctcgccgacgaactgatgaagacacgccccgatctcagggtggtctacacgtcaggctat
accgagaatgcgatcatccatcacggccggctggattccggcgtcctgctgctggccaag
ccctatcgcaaatcggatctcgcgcggatcatccgcaaggcactgagcggctga
DBGET
integrated database retrieval system
