Bradyrhizobium ottawaense: CIT37_12975
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Entry
CIT37_12975 CDS
T05524
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bot
Bradyrhizobium ottawaense
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bot03032
]
CIT37_12975
03400 DNA repair and recombination proteins [BR:
bot03400
]
CIT37_12975
Enzymes [BR:
bot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CIT37_12975
DNA replication proteins [BR:
bot03032
]
Prokaryotic type
DNA Topoisomerases
CIT37_12975
DNA repair and recombination proteins [BR:
bot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIT37_12975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
AWL98047
UniProt:
A0A2U8PKZ3
LinkDB
All DBs
Position
612766..613869
Genome browser
AA seq
367 aa
AA seq
DB search
MLRETGNEEQVLDRTAEVAAAIAEEGLRYVSDSSPGYTRKRTGTTFSYYDKDGKRITDAA
VIRRIKSIGIPPAYESVWICPSANGHIQATGLDARGRKQYRYHPKWRELRDQNKYEHMIQ
FAAALPALRARVEADMKLDGLPREKVLATIVSLLEKTLIRVGNAEYAEKNKSYGLTTMRR
KHVSVGRGVLRFDFTGKSGKQWKLRVEDKRIAAIVKRCAEIPGHELFKYLDDDGQPRTVD
SGDVNAYIKDITGEDFSAKDFRTWAGTVLAAFALAEFKKYDSQAEAKRNVVAAIENVSKQ
LGNTPAVCRKCYVHPEVLDAYMSGDLVKMIEAKIAQKFKRQYAKLTSDEIMVLAFLRKRL
DALKAAA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctccgagagaccggcaacgaagaacaggttttggaccgcactgccgaagtcgcggct
gccatcgcggaagaaggccttcgctacgtcagcgattcctcccccggttacacgcgcaag
cggacggggacaacgtttagctactacgacaaggatggtaagcgaattaccgacgctgcc
gtcatccgccgcatcaagtctatcggtatcccgccggcatacgagtccgtgtggatttgc
ccctccgccaacggtcacatccaggcgaccgggctcgatgcgcgaggccgcaaacagtat
cgctatcaccccaagtggcgggaacttcgtgaccagaacaagtacgagcacatgatccag
ttcgcggctgcgctgccggcgctccgcgccagggtcgaagccgacatgaagctggacgga
ctacctcgcgagaaggtgctggccacgatcgtcagtctgctggagaagacgttgatccgg
gtcggcaacgccgaatatgcggagaagaacaagtcctacgggctcaccacgatgcgacgc
aagcacgtttccgtcggccgcggtgtccttcggttcgacttcacgggtaagtcgggcaag
cagtggaagcttcgcgtcgaggacaaacggatagccgcgatcgtgaagcgatgcgctgag
atcccgggacacgagctcttcaagtacctcgacgatgacggacagccgcgcaccgtcgat
tccggcgacgtcaacgcctacatcaaggacatcacgggagaggacttcagcgccaaggat
ttccggacttgggcggggacggttctcgcggcgttcgcccttgccgaattcaagaagtac
gatagccaagccgaggccaagcgcaacgtggtcgccgcgattgagaacgtctcgaaacag
ctcggcaacacgccggccgtctgccggaagtgctatgtgcacccggaagtcttggacgcc
tacatgtcaggtgatctcgtgaagatgatcgaagccaagatcgcgcagaagttcaagcgc
cagtacgccaagcttacgtccgacgagattatggtgctggcgtttctccgcaaacgtcta
gatgctctaaaggccgccgcctag
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