Bradyrhizobium ottawaense: CIT37_17720
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Entry
CIT37_17720 CDS
T05524
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bot
Bradyrhizobium ottawaense
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bot03009
]
CIT37_17720
Enzymes [BR:
bot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CIT37_17720
Ribosome biogenesis [BR:
bot03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CIT37_17720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AWL93782
LinkDB
All DBs
Position
1556850..1558937
Genome browser
AA seq
695 aa
AA seq
DB search
MPRDSDKDNDSRGRRGPAKGGRSGKARGPEKKFAKRGFEGKSEGRGDRDSRPPRGDRDSR
APREGQPFRRREEGDAPRRDFSDRPRFKRDDRGGAERGERSFKPRGDRPFSDRSSRDGEK
RPFKPRGDRPSFGRDDRPPRRDRDDSRPAGRTGDRKFGDKKPYAPRGDRPERKFDGERKF
SRGGPDRDRGERSDSKPWQKRDDRPRGDRPPRKDFGKGPRKDFGGRDRGEDKPWQKRDDR
QGSGEDRPRFSRSRDDRTSGDRPFRERPKFDRPREDRPKFDRPRRDGDGDRGGRGGDRPK
FNRPRERSEGRSDWHEHPRSEGRFGDRPRRENEDDSRIFEKRPAFGGRGAYRERDRDFDR
RPRREEEPKPKKAGERIAKALARAGLASRRDAEEMVTQGRVTVNGRVINSPALDITKNDV
VLVDGKPLPERERTRLFLYHKPRGLMTTHDDPEGRPTVFDNLPEGLPRLISIGRLDFNTE
GLLLLTNDGGLARTLELPDTGWLRRYRVRAHGDVTQAQLDELKNGIEVEGVKYGPIEATL
ERDQGANVWLVFAIREGKNREVRNVCAHLGLEVNRLIRVSYGPFQLGEVPEGQVEEIKSR
VLRDQLGDKVIEKSGAQFDVPSKSSSRVDDAPRETKPASKRAVINDRKGRRVLVQRTGSE
EARERNEEEASGYGPPRRPKRGYHGKRDLTPKDGE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgacagcgacaaagacaacgattcccgcggccggcgaggcccggccaaaggc
ggccgttccggcaaggcgcgcggccccgagaagaagttcgccaagcgcggttttgagggc
aagagcgaagggaggggcgatcgcgacagccgcccgccccgtggcgaccgcgacagccgc
gcgccccgcgagggtcaacccttccgccgccgcgaggagggcgatgccccgcgccgcgat
ttttccgaccgtccccgcttcaagcgcgatgaccgcggcggcgcggagcgtggcgagcgc
agcttcaagccgcgcggcgaccgtccgttctccgatcgctcctcgcgcgatggcgagaag
cgtcccttcaagccgcgtggcgatcgcccgtcctttggccgcgacgaccgtccgccgcgc
agggatcgcgacgattcccgcccggccggccggaccggtgacagaaagtttggcgacaag
aagccctatgcgccgcgtggcgaccgcccggaacgcaagttcgacggcgagcggaagttc
tcgcggggcggtcctgatcgcgaccgcggcgagcgctccgattccaagccgtggcagaag
cgcgacgaccgtccgcgtggcgatcgtccgccgcgcaaggattttggcaaaggcccgcgc
aaggatttcggcggccgtgatcgcggcgaggacaagccctggcagaagcgcgacgaccgt
caaggtagcggcgaggaccgtccgcggttctcgcgctcgcgcgacgatcgcacatcgggc
gatcgtccgttccgcgagcggcccaaattcgatcggccgcgcgaggaccgtccgaaattc
gatcggccccgtcgcgatggcgatggcgaccgcggcgggcgtggcggtgaccggccgaaa
ttcaatcgtccgcgcgagcggtcggaaggccgttccgattggcacgagcatccgcgcagc
gaaggccgtttcggtgatcgcccgcgccgtgaaaacgaagacgatagcaggattttcgag
aaacgccccgccttcggcggccgcggcgcctatcgcgagcgcgaccgtgatttcgaccgg
cggccgcgccgggaagaagagccgaagccgaagaaggccggcgagcgcatcgccaaggcg
ctggcccgcgcggggcttgcctcgcgccgcgacgccgaagagatggtcacgcagggccgc
gtcaccgtcaacggccgcgtcatcaactcgccggcgctcgacattacaaagaacgacgtc
gttctggtcgacggcaagccgttgccggagcgcgagcgcacgcggctgttcctctatcac
aagccgcgcggcctgatgaccacgcatgacgatcccgagggtcgtccgaccgtgttcgac
aacctgcccgaaggcctgccgcggctgatctcgatcggccggctcgatttcaataccgag
ggcctgctgctgctcaccaatgacggcggcctcgcgcggacgctcgagctgccggacacc
ggctggctgcgccgctaccgcgtccgcgcccatggcgacgtcacccaggcgcagctcgac
gagctcaagaacggcatcgaggtcgagggcgtcaaatacggtccgatcgaagcgacgctg
gagcgcgaccagggcgccaatgtctggctggtgttcgcgatccgcgaaggcaagaatcgc
gaggtgcgcaatgtctgcgcccatctcgggctcgaggtgaaccggctgatccgggtttcc
tacggtccgttccagctcggcgaggtgcccgaaggtcaggtcgaggagatcaagtcgcgc
gtgctgcgcgaccagctcggcgacaaggtgatcgagaagtcgggggcgcagttcgacgtg
ccctcgaaatcttcgtcgcgcgtcgacgatgcgccgcgcgagacgaagcccgccagcaag
cgtgccgtcatcaacgaccgcaagggccgccgcgtgctggtgcagcgcaccggcagcgag
gaggcgcgcgagcgcaacgaggaagaggcgagcggctacggcccgccgcgccgtccgaaa
cgcgggtatcacggcaagcgcgacctgacgccgaaggatggcgagtaa
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