| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
bot Bradyrhizobium ottawaense
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bot00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIT37_27285 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:bot03021]
CIT37_27285 (rpoC)
03400 DNA repair and recombination proteins [BR:bot03400]
CIT37_27285 (rpoC)
Enzymes [BR:bot01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIT37_27285 (rpoC)
Transcription machinery [BR:bot03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CIT37_27285 (rpoC)
DNA repair and recombination proteins [BR:bot03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CIT37_27285 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3548932..3553128
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| AA seq |
1398 aa
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA
MIGAEAIRELLKGMDLEKLEATLRLEMQETDSDIKHKKLAKRLKIVEAFRHSGNKPEWMI
MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKVFGEMAELEHALH
AKVIHLHTKIKYRWEGIDETGKISKRWIETTAGRVMLGNLLPKNPRVPYEIINKLMTKRE
ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHSKWKIVDTTRTL
AKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKAMMKEISSTKKTASGADADINSIYM
MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIITQSDCGTKLGIKMRAIVDAGTVVASLGSRILGRTA
CEDIRDSSGKVIIKRDTLMEESHLDAIQQGGVQEVKIRSALTCELVNGICGKCYGRDLAR
GTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVEANFDGKIVIRNKAIA
RNSEGHLVAMVRNMVVAIVDADGTERATHRVQYGSRLHVDEGDMVKRGQRIVEWDPYTRP
LLTEVEGTIGFEDLVEGQSISETLDEATGIAKRVVIDWRSTRGGADLRPAIVVKGKDGKV
LKLARGGDARYMLSVDAILSVDVGAKVNPGDILARVSTESAKTRDITGGLPRVAELFEAR
RPKDAAIIAEISGTIRFGRDYKNKRRISIEPMDKTDEPREYLIPKGKHIHLQDGDVVEKG
DFIVEGNPAPHDILAVKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEVT
DQGDTDMISGEQVDKIEFDALNEKAKEEGKKIATGTPVLLGITKASLQTRSFFSAASFQE
TTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAMKRDKLILDEREKQA
AVVSPAPEAELPALPPAE |
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| NT seq |
4197 nt +upstreamnt +downstreamnt
atgaaccaagaaattatgaatctcttcaacccgacgacgccggctcaggtcttcgaccag
atccggatctcgatcgcgtctccagagaagattctgtcctggtcctacggcgagatcaag
aagccggagaccatcaactaccgcaccttcaagcccgagcgcgacggcctgttctgcgcc
cgcatcttcgggccgatcaaggattacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgctcggttgaggtcacgctgtcgcgcgtccggcgc
gagcgcatgggccatatcgagctcgcagcccccgtcgcccacatctggttcctgaagtcg
ctgccctcgcgcatcggcctgctgctcgacatgacgctgaaggatctcgagcggatcctc
tacttcgaatactacgtcgtgctcgagccgggcctcaccgcgctgaaggaccgccagctg
ctgtcggaagacgagtatctgaaggcgcaggacgagtacggccaggacagcttcaccgcc
atgatcggcgcggaagcgatccgcgagctgctcaagggcatggacctcgagaagctcgag
gcgaccttgcgcctggagatgcaggagaccgactccgacatcaagcacaagaagctcgcc
aagcgcctgaagatcgtggaagcgttccgccactccggcaacaagccggaatggatgatc
atgaccgtggtcccggtgattccgccggatttgcgtccgctggtgccgctggacggcggc
cgcttcgcgacgtcggatctgaacgacctctaccgccgcgtcatcaaccgcaacaaccgc
ttgaagcggctgatggagctccgcgcgcccgacatcatcatccgcaacgagaagcgcatg
cttcaggaagcggtcgatgcgctgttcgacaacggccgccgcggccgcgtcatcacgggc
gccaacaagcgcccgctgaagtcgctcgccgacatgctcaagggcaagcagggccgcttc
cgtcagaaccttctgggcaagcgtgtcgactattcgggccgttcggtgatcgtggtcggt
cccgagctgcgcctgcatcagtgcggcctgccgaagaagatggcgctcgagctgttcaag
ccgttcatctattcgcggctcgacgccaagggcctgtccaccacggtgaagcaggccaag
aagctggtcgagaaggagcggcccgaggtctgggacatcctggatgaggtcatccgcgag
catccggtgctgctcaaccgcgcaccgacgctgcatcgtctcggcatccaggcgttcgag
cccgtgctgatcgagggcaaggcgatccagcttcacccgctggtctgctccgcgttcaat
gccgacttcgacggcgaccagatggccgtgcacgtcccgctgtcgctcgaagcgcagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgcacccggcgaacggacagccg
atcatcgtgccgtcgcaggacatcgtgctcggtctctactacgtctcgatcatgcgcgaa
ggcctgcccggcgagggcaaggtgttcggcgagatggccgaactcgagcacgcgctgcac
gcgaaggtcatccacctccacaccaagatcaagtaccggtgggaaggcatcgacgagacc
ggcaagatctcgaagcgctggatcgagaccaccgctggccgcgtcatgctcggcaatctg
ctgccgaagaacccgcgcgtcccgtacgagatcatcaacaagctgatgaccaagcgcgag
atctcgggcgtcatcgaccaggtctaccgccactgcggccagaaggagacggtgatcttc
tgcgaccgcatcatggcgctcggcttctacaacgcgttcaaggccggcatctcgttcggc
aaggacgacatggtcgtgccgcactccaagtggaagatcgtcgacaccacccgtacgctg
gcgaaggatttcgagcagcagtacaacgacggcctgatcacccatggcgagaagtacaac
aaggtcgtcgacgcctggtcgaaggccacggaagaaatcgccaaggcgatgatgaaggag
atctcctccaccaagaagacggcgagtggagcggatgccgacatcaactcgatctacatg
atggctcactccggcgcccgcggttcgccggcccagatgcgccagctcgccggcatgcgc
ggcctgatggccaagccgtcgggcgagatcatcgagacgccgatcatctcgaacttcaag
gaaggcctttcggttctcgagtacttcaactcgacccacggcgcccgcaagggcctcgcg
gacaccgcgttgaagaccgcgaactcgggctacctgacccgtcgtctcgtcgacgtcgcg
caggactgcatcatcacgcagagcgactgcggcaccaagctcggcatcaagatgcgcgcc
atcgtcgatgccggcaccgtggtggcttcgctcggctcgcgcatcctcggacgcacggcc
tgcgaagatatccgtgacagctccggcaaggtgatcatcaagcgcgatacgctgatggaa
gaaagccatctggacgccatccagcagggtggtgtgcaggaggtgaagatccgctcggcg
ctgacctgcgaactcgtcaacggcatctgcggcaagtgctatggccgcgacctcgcccgc
ggcacgccggtcaaccacggcgaagcggtcggcgtcatcgcggcgcagtcgatcggcgag
ccgggcacccagctcaccatgcgcaccttccatatcggtggtgcggcgcagctcaacgag
cagtcgttcgtcgaagccaacttcgacggcaagatcgtgatccggaacaaggccatcgcc
cgcaacagcgaaggccacctggtcgcgatggtgcgcaacatggtggtggcgatcgtcgat
gccgacggcaccgagcgtgcgacgcaccgcgttcagtacggttcgcgcctgcacgtcgac
gaaggcgacatggtcaagcgtggccagcgcatcgtcgagtgggatccctacacccgtccg
ctcctcaccgaggtcgaaggtaccatcggcttcgaggatctggtcgaggggcagtcgatc
tcggaaacgctcgacgaagccaccggtatcgccaagcgcgtggtcatcgactggcgctcg
acccgcggcggcgcggacctgcgtccggccatcgtggtcaagggcaaggacggcaaggtg
ctcaagctcgcccgtggcggcgatgcccgctacatgctgtcggtcgacgccattctctcg
gtcgacgtcggcgccaaggtcaatccgggcgatatcctcgcccgtgtctcgaccgaaagc
gccaagacgcgtgacatcaccggcggtctgccgcgggtggcggaactgttcgaggcacgg
cgtccgaaggatgcggcgatcattgccgaaatctcgggcaccatccggttcggacgcgac
tacaagaacaagcgtcgcatctcgatcgagccgatggacaagaccgacgagccgcgcgag
tacctgatcccgaagggcaagcacatccaccttcaggacggcgacgtcgtcgaaaagggc
gacttcatcgtggaaggcaacccggcgccgcacgacatcctggcggtcaagggcatcgag
gaactcgcggcctacctggtcaacgagatccaggaggtctaccggctccagggcgtgctc
atcaacgacaagcacatcgaggtgattgtccgtcagatgctccagaaggtggaagtcacc
gaccagggcgacacggacatgatctccggcgagcaggtcgacaagatcgagttcgacgcg
ctgaacgagaaggcgaaggaagagggcaagaagatcgctacggggacgccggttctgctc
ggcatcaccaaggcgagcctccagacccgctccttcttctcggcggcctcgttccaggag
accacccgcgtcctcacggaagcggcggtcaacggcaaggtcgatccgctcgaaggcctc
aaggagaacgtcatcgtcggccggctaattccggcaggcaccggcgcctccatggccaag
attcgcgaagtcgccatgaagcgcgacaagctgatcctggacgagcgcgagaagcaggcg
gcggtcgtgtcgcccgcgccggaagcggagcttcctgcgctgccgcccgcggaatga |
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