KEGG   Bradyrhizobium ottawaense: CIT37_29665
Entry
CIT37_29665       CDS       T05524                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bot  Bradyrhizobium ottawaense
Pathway
bot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CIT37_29665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bot03019]
    CIT37_29665
Messenger RNA biogenesis [BR:bot03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CIT37_29665
SSDB
Motif
Pfam: RMMBL RNase_J_C Lactamase_B_2 Lactamase_B
Other DBs
NCBI-ProteinID: AWL95844
UniProt: A0A2U8PEB5
LinkDB
Position
4001351..4003018
AA seq 555 aa
MAKPEELVFAPLGGVGEIGMNLSIYGLGSRQQRAWMAVDLGVSFGDEEHLPGIDLIMPDI
SFLEKERKNLMGLVLTHAHEDHFGAIIDLWPKLKCPIYATQFSAALFEAKCAAERNAPKI
PVTVVPSGGRVDVGPFNVEFIPVAHSIPEAHALAIHTEAGTVLHTGDWKIDPTPTLGSPT
DEKRLRELGEEGVLALIGDSTNAVRDGRSPSEAEVARTIIDLVKAAKGRVAVTTFASNVA
RIKAVAAAAKAADREVVVVGRAMERVVQVARECGYLDGVQNFRSPEVYGHPQDKVLALCT
GSQGEPRAALARIANDDHPEITLNRGDSVIFSSRTIPGNEKAVGSIINNLVLQGVEIITD
RDHLVHVSGHPRRDELRDMIGWVKPRLLIPVHGEALHLNEHAKLARAAGVPRVLVVRNGD
LIKLGPGDPGIIGEVPSGRLYKDGTILEDSKSRAVVERRRMAFSGCAFVAIAMTEQGELA
DDPEVDLVGIPDKNRAGEPFDDLVFDAVVSTIEGLPKARRRDPDALGESVRRAVRAVINE
HWGKKPPCLVHVLTV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggcgaagcccgaagaactggtgtttgcgccgctgggcggcgtcggcgagatcggcatg
aacctgtcgatctatgggctcggcagccgccagcagcgcgcctggatggcggtcgatctc
ggcgtctccttcggcgacgaagagcacctgccgggcatcgacctgatcatgcccgacatc
agcttcctggagaaggagcgcaagaacctgatgggcctggtgctgacccatgctcatgag
gaccatttcggcgcgatcatcgacctctggccgaagctgaaatgcccgatctacgcgacg
cagttcagtgcggccctgttcgaggccaaatgcgctgccgagcgcaacgcgccgaagatc
cccgtgacggtggtgccgtccggcggccgcgtcgacgtcggcccgttcaacgtcgagttc
attcccgtcgcccactccattcctgaagcgcatgcgctggcgatccacaccgaagccggc
acggtgctgcacaccggcgactggaagatcgatccgaccccgaccctggggagcccgacc
gacgagaagcgtctgcgcgaactcggcgaggagggcgtgctcgctctgatcggcgattcc
accaatgcggtgcgcgacggccgctcgccgtccgaggccgaggtcgcccgcaccatcatc
gatctggtgaaggccgcaaagggccgcgtcgcggtgacgaccttcgcttccaacgtcgcg
cgcatcaaggccgtcgctgccgctgccaaggccgccgaccgcgaggttgtcgtggtcggc
cgcgccatggagcgcgtggtgcaggtcgcgcgcgaatgcggctatctcgacggcgtgcag
aatttccgctcacccgaagtctacggccatccgcaggacaaggtgctggcgctgtgcacc
ggcagccagggcgagccgcgcgcggcgctggcgcgcatcgccaatgacgaccatcccgag
atcacgctgaaccgcggcgatagcgtcatcttctcctcgcgcacgatcccgggcaacgag
aaggcggtcggctcgatcatcaacaatctggtgctgcagggcgtcgagatcatcaccgat
cgcgaccatctcgtccacgtctccggccatccccgccgcgacgaattgcgcgacatgatt
ggctgggtgaagccgcggctcctgatccccgtccacggcgaggcgctgcatctgaacgag
cacgccaagctggcgcgcgccgccggcgtgccgcgcgtgctggtggtccgcaacggcgac
ctgatcaagctcggcccgggcgatcccggcatcattggcgaagtgccttccggccgcctc
tacaaggacggcacgatcctggaggattccaagtcccgcgccgtggtcgagcggcggcgc
atggcgttttccggctgtgccttcgtcgccatcgccatgaccgagcagggcgagctggcc
gacgatcccgaggtcgatctggtcggcatccccgataagaacagggcaggcgagcccttc
gacgacctcgtcttcgatgccgtggtctccaccatcgagggcctgccgaaggcgcgccgc
cgcgaccccgacgcattgggcgagtctgtgcgacgtgctgtccgggccgtgatcaacgaa
cattggggcaaaaagcccccctgtctggtacacgtactgacagtataa

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