Bradyrhizobium ottawaense: CIT37_30440
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Entry
CIT37_30440 CDS
T05524
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CIT37_30440 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bot01007
]
CIT37_30440 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bot03016
]
CIT37_30440 (serS)
Enzymes [BR:
bot01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CIT37_30440 (serS)
Amino acid related enzymes [BR:
bot01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CIT37_30440 (serS)
Transfer RNA biogenesis [BR:
bot03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CIT37_30440 (serS)
Prokaryotic type
CIT37_30440 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
LRR_At5g56370
Motif
Other DBs
NCBI-ProteinID:
AWL95974
UniProt:
A0A2U8PEP0
LinkDB
All DBs
Position
4169985..4171316
Genome browser
AA seq
443 aa
AA seq
DB search
MHDIKSIRDNPQAFDAGLARRGLKPLSASLLAIDETRRAAILASEQAQARRNAASKEIGD
AKKAKDEARAAKLMAEVAELKTTMPQLEAAAKAADEELTKELSAIPNIPFDDVPDGVDEH
GNVQHHVFGNKRNYGFAPKLHDDLGTALGDMDFEAAAKLSGARFVVLKKGLARLERALGQ
FMLNLHVDEHGYTEINPPLLVRNEIMFGTGQLPKFEDDQFWAIKGELLASPDQERLRTER
LGLIPTAEVSLTNLARESILDEKQLPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVE
LVSITTPEVSKDELERMLSCAEQVLQRLGLHYRVMTLCAGDMGFSSQKTYDIEVWMPGQG
EGGAFREISSCSVCGDFQARRMDARSRGPDGKPRFVHTLNGSGTALGRALIAVMETYQQE
DGSIAVPDVLQPYMGGVKVIGRE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacatcaaatcgatccgcgacaatccgcaagccttcgacgccggcctcgcccgg
cgcggcctgaagccgttgtcggcctcgctgctcgcgatcgacgagacgcggcgcgcggcg
atcctggcctccgagcaggcgcaggctcggcgcaacgcggcctccaaggaaatcggcgat
gccaagaaggcgaaggacgaggcgcgcgcggccaagctgatggccgaggtcgccgagctc
aagaccacgatgccgcagctcgaggccgccgcgaaagccgccgatgaggagctgaccaaa
gagctgtccgcgatcccgaacattccgttcgacgacgtgcccgatggtgtcgacgagcac
ggcaacgtgcagcaccacgtgttcggcaacaagcgcaactacggctttgcgccgaagctg
catgacgatctcggtaccgcgctcggtgacatggatttcgaggcggcggcaaagctctcc
ggcgcccgtttcgtcgtgctgaagaagggactggcgcggctcgaacgcgcgctcggccag
ttcatgctgaatctgcatgtcgacgagcacggctataccgagatcaatccgccgctgctg
gtgcgcaacgagatcatgttcggcaccggacaattgccgaagttcgaggatgatcagttc
tgggcgatcaagggcgagctccttgcctcgcccgaccaggagcggctgaggacagagcgc
ctcggcctcattccgaccgctgaggtgtcgctgaccaacctcgcgcgcgaatccatcctc
gacgagaagcagttgccgatgcggctcaccgcgctgacgccgtgctttcgtgccgaggcc
ggcgcggccggacgtgacacgcgcggcatgatccgccagcaccagttcaccaaggtcgag
ctggtctcgattacgacgccggaggtgagcaaggacgagctggagcgcatgctgtcctgc
gccgagcaggtgctgcagcggctcgggctgcattatcgcgtgatgacgctttgcgcagga
gacatgggtttctcgtcgcaaaaaacctatgacatcgaggtctggatgccggggcagggc
gagggcggggcattccgcgagatctcgagctgctcggtctgcggcgacttccaggcacga
cgcatggatgcgcgctcgcgcggtcccgacggcaagccgcgtttcgtccacacgctgaac
ggctccggcaccgcgctcggccgcgcgctgatcgccgtgatggagacctatcagcaggag
gacggctcgatcgcggtccccgacgtgcttcagccctatatgggcggcgtgaaggtgatc
gggcgcgagtag
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