Bradyrhizobium ottawaense: CIT37_31005
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Entry
CIT37_31005 CDS
T05524
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bot
Bradyrhizobium ottawaense
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bot03009
]
CIT37_31005 (rimO)
Enzymes [BR:
bot01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CIT37_31005 (rimO)
Ribosome biogenesis [BR:
bot03009
]
Prokaryotic type
ribosomal protein modification factors
CIT37_31005 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AWL96070
UniProt:
A0A2U8PEP1
LinkDB
All DBs
Position
complement(4283460..4284785)
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AA seq
441 aa
AA seq
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MDQAAAPKVSFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLSAIGEAMAENGKVIVTGCMGAEPEQIEQAYPGVLSITGPQQYESVLDAVHRALPPAH
NPHVDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPANDVLREAERLV
GAGVKELLVISQDTSAYGVDLKYAESPWKDRQVRAKFLDLARELGELGAWVRLQYVYPYP
HVDEVIALMNEGKVLPYLDIPFQHASPEVLKAMKRPAAQDKTLARIKRWREECPDLALRS
TFIVGFPGETDADFAYLLDWLDEAEIDRLGCFKYEPVAGATSNAIENPVPEEVKQERYNA
LMARQQKISARRLKRKVGTRQQVIIDEVGPTVAKGRSKADAPEIDGAVYLTSRRPLRVGE
IVTAKIERADQYDLHGSVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggcggctgcgcccaaggtcagctttgtgtcgctcgggtgtcccaaggcattg
gtggattccgagcgcatcatcacgcgcttgcgcgcggagggctacgagctcgcccgcaag
catgacggggccgacatcgtcatcgtcaacacctgcggcttcctcgacagcgccaagcag
gaatcgctctcggcgatcggcgaggccatggccgagaacggcaaggtgatcgtgaccggc
tgcatgggcgcggaacccgagcagatcgagcaggcctatcccggcgtgctctccatcacc
ggcccgcagcaatacgagagcgtgctcgacgccgtgcaccgcgcgctgccgccggcgcac
aatccgcatgtggacctggtgccgccgcagggcatcaagctgacgccgcgccactacgcc
tatttgaagatctccgagggctgcaacaaccgctgcaccttctgcatcatcccgaagctg
cgcggcgacctcgtctcgcgcccggccaatgacgtgctgcgcgaggccgagcgcctggtc
ggcgccggcgtcaaggaattgctggtgatctcgcaggacacctcggcctatggcgtcgat
ctcaaatatgccgagagcccgtggaaggaccgccaggtccgcgccaaattcctcgacctc
gcgcgcgaactcggcgagctcggcgcatgggtccggctgcaatatgtctacccctacccg
catgtcgacgaggtcatcgcactgatgaacgagggcaaggtgctgccctatctcgacatc
ccgttccagcatgcgagcccggaggtgctgaaggcgatgaagcgcccggcggcgcaggac
aagacgctggcgcggatcaagcgctggcgcgaagagtgccccgatctcgccttgcgctcg
actttcatcgtcggcttccccggcgagaccgatgccgatttcgcctatctgctcgactgg
ctcgacgaggccgagatcgatcgcctcggctgcttcaaatacgagccggttgcaggcgcg
acatcgaacgcgatcgagaacccggtgccggaagaggtcaagcaggagcgctacaacgcg
ctgatggcccggcagcagaagatctccgcgcgcaggctgaagcgcaaggtcggcacgcgc
cagcaggtcatcatcgacgaagtcggcccgaccgtcgccaagggccgctccaaggccgat
gcgccggagatcgacggcgcggtttatctgacgagccgccgccccttgcgcgtcggcgag
atcgtcaccgcgaagatcgagcgcgccgaccagtacgacctgcacggcagcgtcgcgggg
ttctga
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