KEGG   Bradyrhizobium ottawaense: CIT37_31480
Entry
CIT37_31480       CDS       T05524                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
bot  Bradyrhizobium ottawaense
Pathway
bot02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bot00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CIT37_31480
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:bot02022]
    CIT37_31480
Two-component system [BR:bot02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   CIT37_31480
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 Mg_chelatase AAA_5 AAA_16 AAA_2 AAA MCM bpMoxR AAA_30 AAA_19 ResIII FleQ AAA_7
Other DBs
NCBI-ProteinID: AWL96155
UniProt: A0A2U8PEG7
LinkDB
Position
complement(4386035..4387405)
AA seq 456 aa
MASEILIVDDEADIRDLVAGILEDEGFVTRTARDSDSALAEIANRRPHLVFLDIWLQGSK
LDGLQLLEQVKKDNADLPVVMISGHGNIETAVAAIKRGAYDFIEKPFKADRLILVATRAL
ENSRLKREVKELKQLAPSASQLVGRSPSMNQLRQTIERAAKANSRILIVGPAGAGKELTA
RTLHTASGRADGPFVVINAAAITPERMEHELFGVEQSNGEQARKPGALEEAHGGTLFIDE
IADMPRETQNKILRVLVEQSFQRVGGTAKVQVDVRIISSTARNLEEEIAAGHFREDLYHR
LSVVPIRVPALSERREDIPELIDYFMEQISAGSGLPKRQIGQDAMAVLQSHVWPGNVRQL
RNNVERVMILAAGGPEVIITADMLPQDVGSMVPAMPTSNNGEHIMGLPLREAREVFERDY
LIAQISRFSGNISRTAEFVGMERSALHRKLKALGVG
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggcaagtgaaattctgattgtcgatgatgaggccgatattcgagatctcgtcgcaggc
attctcgaggacgagggttttgtcacgcggactgcgcgcgacagcgactctgcactggct
gaaatcgccaaccggcggccgcatctggtgttcctcgacatctggctgcagggctccaag
ctcgacggcttgcagctgctggagcaggtcaagaaggacaatgccgacctgccggtcgtg
atgatctccggccacggtaacatcgagaccgcggtggccgcgatcaagcgcggcgcctac
gacttcatcgagaagccgttcaaggccgaccggctgatcctggtcgcgaccagggcgctg
gagaactcgcggctcaagcgcgaggtcaaggagctgaagcagctggcgccgagcgcaagc
cagctcgtcggccgctcgccgagcatgaaccagttgcgccagaccatcgagcgcgcggcc
aaggccaacagccgcatcctgatcgtcggtcccgccggcgccggcaaggaattgacggca
cgcacgctgcatacggcctcgggccgcgccgacggtcccttcgtcgtcatcaacgccgcc
gcgatcacgcccgagcgcatggagcacgagctgttcggcgtcgagcagtccaacggcgaa
caggcgcgcaagcccggcgcgctcgaggaagcccatggcggcacgctgttcatcgacgag
atcgcggacatgccgcgcgagacccagaacaagatcctgcgggtgctggtggagcaatcg
ttccagcgcgtcggcggcaccgccaaggtgcaggtcgatgtgcgcatcatctcctcgacc
gcgcgcaatctcgaagaggagatcgcggccggccacttccgcgaggacctctatcatcgg
ctctcggtggtgccgatccgcgtgcctgcgctctccgagcggcgcgaggacatcccggaa
ttgatcgactatttcatggagcagatctcggccggtagcggcctgcccaagcggcagatc
gggcaggacgcgatggcggtgctgcaatcgcatgtctggccgggcaatgtgcgccagctc
cgcaacaacgttgaaagagtcatgattctggccgccggtggaccggaggtcatcatcacg
gccgacatgttgccgcaggacgtcggctccatggtgccggcgatgccgaccagcaacaat
ggcgagcacatcatgggcctgccgctgcgcgaggcgcgcgaagtgttcgagcgcgactat
ttgattgcacagatcagccgtttttcaggaaatatttctcgcacagccgagttcgttggc
atggaacggtcggcgctgcatcgaaagttgaaagcgctcggtgtcggctag

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