Bradyrhizobium ottawaense: CIT37_32260
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Entry
CIT37_32260 CDS
T05524
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot03410
Base excision repair
bot03430
Mismatch repair
bot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT37_32260 (recJ)
03430 Mismatch repair
CIT37_32260 (recJ)
03440 Homologous recombination
CIT37_32260 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bot03400
]
CIT37_32260 (recJ)
DNA repair and recombination proteins [BR:
bot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CIT37_32260 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CIT37_32260 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CIT37_32260 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
AWL96279
UniProt:
A0A2U8PEV7
LinkDB
All DBs
Position
complement(4545715..4547556)
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AA seq
613 aa
AA seq
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MTPPATALPVEAPQAFLGVARSLTDKLWRDRLDPRGAAQALAMVQRHQLPELLARVLAGR
GVDIDAVADFLDPTIRKLLPDPFTVTEMEAAAKRIADGAAKGEKVAIFGDYDVDGATSAA
LLAWHLRHCGLDPLIHIPDRIFEGYGPNVEAVRGLAAKGATLLVTVDCGTTSIEPLAEAK
RLGMSVVVIDHHQAGTELPEVDALVNPNRLDDLSGLGHLAAVGLVLVTLVAVNRELRQRG
FWSTEMPEPDLLGMLHHVALGTVADVAPLIGLNRAFVAKGLIAMRRRDHVGHTALMDVAR
LNGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLEGDSVEAARIAAELDRLNSERRVIE
QAAEAQAEAEALASIGLEDKLSVIVTASEGWHPGVVGLVASRLKEKFSRPAFAIALEPGG
IGTGSGRSIAGVDIGKAVRQAVTDGILLKGGGHAMAAGVTLRKEKLAEFRAYLENALAQD
VAEARHVNELYIDGAVSARAVTTELAATLNRAGPFGSGNPEAVLALPAHQLVFADEVGQA
HLRLRFKSGDGAIVNGIAFRSIGQKLGNALLANRGQQLHVAGSLSVDRYQGVERVQFRVI
DVALPDQGPSVIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcctgcaaccgccttgcccgtcgaagcgccccaggcgtttctcggcgttgcg
cgctcgctgaccgacaagctctggcgcgaccggctggatccccgcggagcggcccaggcg
ctcgccatggtgcagcggcaccagcttcccgaactgctggcccgggtattggccggccgc
ggcgtcgacatcgacgcagtcgccgacttcctcgatccgaccatccgcaagctcctgccg
gacccctttaccgtgacggagatggaggccgcggcgaagcggatcgcggatggcgcggcg
aagggcgagaaggtcgcgattttcggcgattacgacgtcgacggcgcgacctcggcagcg
ctgctcgcctggcacctgcgccattgcggactcgatccgctgatccacattcccgaccgc
attttcgaaggctacgggcccaatgtcgaagcggttcgtggcctggcggcaaagggcgcc
acgctgctcgtcaccgtcgattgcggcaccaccagtatcgagccgctcgcggaagcaaaa
cggctcggcatgtccgtggtcgtgatcgaccatcaccaggccggcaccgagctgccggag
gttgacgcgctggtcaatccgaaccggctcgatgatctctccggcctcggccatctcgcc
gctgtaggtctcgtgctggtgacgctggttgcggtcaaccgcgagctgcgtcagcgcggc
ttctggagcacggagatgcccgagcccgatctgctcggcatgctgcatcacgtcgcgctc
gggacggttgccgacgtcgcgcccctgatcggcctcaaccgcgctttcgtcgccaagggg
ctgatcgcgatgcggcgccgcgaccatgtcggccataccgcgctgatggatgtggcgcgg
ctcaacgggccgccggaggcctggcatctcggcttcatgctggggcctcgcatcaatgcc
ggcggccgcatcggccgcgccgatctcggcgtgcggctcttgctggaaggcgacagcgtc
gaggccgcgcggatcgccgccgagctcgaccgcctcaacagcgagcgccgcgtcatcgag
caggcggccgaagcgcaagccgaagccgaggcgctggcctcgatcgggctcgaggacaag
ctcagcgtcatcgtcacggcgtccgaaggctggcaccccggcgtcgtcggcctcgtggcc
tcccggctgaaggaaaagttctcgcggcccgctttcgccattgctctggagccaggcggc
atcggcaccggctcgggccgctcgatcgcgggcgtcgatatcggcaaggcggtgcggcag
gcggtcactgacggaattctgctcaagggcggcggccacgcgatggctgcgggcgtgacg
ctccgcaaagagaagctcgccgaatttcgcgcctatctcgagaacgcgctggcgcaggac
gtcgcggaggcgcgccacgtcaacgagctctatatcgacggcgcggtctccgcgcgcgcg
gtgacgactgagcttgcggcgacgctgaaccgtgccggtccgttcggcagcggcaatccg
gaagctgtgctggcgctgccggcacaccagctcgtttttgccgacgaggtcgggcaggcg
catctgcgtctgcgcttcaagtcgggcgatggcgccatcgtcaacggcatcgcgttccgc
tcgatcggccagaagctcggcaacgcgctgctcgccaaccgcggccagcaactgcatgtc
gccggttcgctttcggtcgaccgctaccagggcgtggagcgggtgcagttccgcgtcatc
gacgtcgcgctaccggaccaggggccatccgtgattagatga
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