Bradyrhizobium ottawaense: CIT37_33415
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Entry
CIT37_33415 CDS
T05524
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot00190
Oxidative phosphorylation
bot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CIT37_33415
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIT37_33415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bot03019
]
CIT37_33415
Enzymes [BR:
bot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
CIT37_33415
Messenger RNA biogenesis [BR:
bot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CIT37_33415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
WWE89941
LinkDB
All DBs
Position
4771097..4773289
Genome browser
AA seq
730 aa
AA seq
DB search
MDSAQAVETKEKAPETESLPAIASSPERFINRELSWLHFNRRVLEESVNPSHPMLERVRF
LSISANNLDEFFMVRVAGIKAQVREGIAERSPDGLTPSEQLALINRTVSELASDQQAIWR
DLRGTLADVGIVLVEGKEVTKAERTWIEDYFLSNVFPLLTPLAIDPAHPFPFIPSLGFTI
ALQLTRAADGKQMNALIRMPGKIDRFIRLPTEGKAVRLISLEQATALFINRLFPGYNLHG
QGAFRIIRDSELEIEEEAEDLVRLFETALKRRRRGSVIRLEIDAKMPEELRNFVQHALSA
ADDEVFLVDGVQAMNELSQLTRLDRPDLEFTPYVPRHPERVREHGGDIFAAIRQKDLVVH
HPYESFDVVVQFLQQATRDPDVVAIKQTLYRTSNNSPIVRALAEAAEAGKSVTALIELKA
RFDEEANIRWARDLERAGVQVVYGFLELKTHAKLSMVVRREGGSLTTYVHTGTGNYHPVT
ARIYTDLSYFTSDPTIGRDAARVFNFITGYAAPSDLEKMAVSPLTLRKRIIEHIQGETAH
ARHGRHGAVWMKMNALVDPDIIDALYEASQAGVQVELVVRGICCLRPGIPGLSENIRVKS
IIGRFLEHGRIYCFGMGQGLPSAKAAVYISSADMMPRNLDRRVEVLCPLQNPTVHQQVLE
QIMVANLKDNEQSWQLLPDGSSTRMKTAKGEEPFNVHNYFMTNPSLSGRGKSLKESSPRR
LTRRNERHQS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggactctgcgcaagctgttgaaactaaagaaaaagccccagagaccgagagcctgccg
gcgatcgcatcgagtcccgagcgattcatcaaccgcgagctctcctggctgcatttcaac
cgccgcgtcctggaggaatcggtcaatcccagccaccccatgctggagcgggtgcgattc
ctgtcgatttcggcgaataacctcgacgagttcttcatggtccgcgtcgccggcatcaag
gcccaggtgcgtgagggcattgccgaacgcagccccgacggcctgacgccatccgagcaa
ctcgcgctgatcaaccgcaccgtctccgagctcgcctccgaccagcaggcgatctggcgc
gacctgcgcggcacgctggccgatgtcggcatcgtgctcgtcgagggcaaggaggtcacc
aaggcggaacggacctggatcgaggactacttcctcagcaacgtattcccgctgctgacc
ccgctggcgatcgacccggcccaccccttcccgttcatcccgagcctcggcttcaccatc
gcgctccagctcacccgcgccgccgacggcaagcagatgaacgcgctgatccgcatgccc
ggcaagatcgaccgcttcatccgcctgccgaccgagggcaaggccgtccggctgatctcg
ctggagcaggcgaccgccctgttcatcaaccgcctgttcccaggctacaatctgcacggc
cagggcgccttccgcatcatccgcgactccgagctcgaaatcgaggaagaggcggaagac
ctcgtccgcctgttcgagaccgcgctgaagcgccgccgccgcggatcggtgatccggctc
gagatcgacgccaagatgccggaggagctgcgcaacttcgttcagcacgcgctgtcggcc
gccgatgacgaggtgttcctggtcgacggcgtgcaggcgatgaacgagctctcgcagctc
acccgcctcgaccggcccgatctcgaattcaccccttacgtgccgcgccaccccgagcgc
gtgcgcgagcatggcggcgacatctttgccgcgatccggcagaaggacctcgtggtccat
catccctacgaatccttcgacgtggtggtgcagttcctgcagcaggccacgcgcgacccc
gatgtcgtcgcgatcaagcagacgctctaccgcacctccaacaactcgccgatcgtccgc
gcgctggcggaagccgccgaggccggcaaatccgtcaccgcgttgatcgagctgaaggcg
cgcttcgacgaggaagccaatatccgctgggcacgcgacctcgaacgcgccggcgtgcag
gtcgtctacggcttcctcgaactgaagacgcacgcaaagctctcgatggtggtgcgccgc
gagggcggcagcctcacgacttacgtccataccggcaccggcaattatcatccggtcacc
gcgcgcatctacaccgacctctcctacttcacctcggatccgaccatcggccgcgacgcc
gcgcgtgtgttcaatttcatcaccggctatgccgcgccgagcgatctggagaagatggcg
gtgtcgccgctgaccctgcgcaagcgcatcatcgagcacatccagggcgagaccgcgcat
gcgcgccacggccgccacggtgcggtctggatgaagatgaatgcactggtcgaccccgac
atcatcgacgcgctctatgaggcttcccaggccggcgtgcaggtcgagctcgtggtgcgc
ggtatctgctgcctgcgccccggcattcccggcctgtccgagaacatccgcgtcaagtcg
atcatcggacgcttcctggaacacggccgaatctactgcttcggcatgggccagggcctg
ccgagcgccaaagcggctgtgtatatctcctccgccgacatgatgccgcgcaacctcgac
cgccgcgtcgaggtgctgtgtccgctgcaaaatccgacggtgcatcagcaggttctcgaa
cagatcatggtcgcgaatctcaaggacaatgagcagagctggcaattgttgccggacggg
tcctcaacgcgtatgaagaccgcgaaaggcgaggagcctttcaacgtccacaactacttc
atgacaaatccgagtctgtctggccgtggaaagtcgctcaaggaatcctcgccgcgtcgt
ctcacgcgccggaacgaacgccatcaatcctga
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