Bradyrhizobium ottawaense: CIT37_36240
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Entry
CIT37_36240 CDS
T05524
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot00521
Streptomycin biosynthesis
bot00523
Polyketide sugar unit biosynthesis
bot00541
Biosynthesis of various nucleotide sugars
bot01100
Metabolic pathways
bot01110
Biosynthesis of secondary metabolites
bot01250
Biosynthesis of nucleotide sugars
Module
bot_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CIT37_36240 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CIT37_36240 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CIT37_36240 (rfbC)
Enzymes [BR:
bot01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CIT37_36240 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AWL96961
UniProt:
A0A2U8PGS7
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All DBs
Position
complement(5364020..5364577)
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AA seq
185 aa
AA seq
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MLEVRSLAIPDVKLVRSKRFSDTRGYFCETFRRSAFAERGISHDFIQDNQSCSERVGTVR
GLHFQQPPFAQTKLVRVLRGAIVDVVVDLRRRSPTFGRHVSVKLDSETDEQLLVPKGFAH
GFCTLEPQTTVFYKVDEVYSPDHDAGIHWADPELAIEWPVRASAAQLSPKDRALPRFDQL
ASVFE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagtgcgaagtttggcgattccggatgtcaagctggtccgatcgaaacgcttt
tccgatacgcgcggctatttttgcgagacgtttcgtcgctctgctttcgccgaaagagga
atttctcacgatttcatccaagacaatcaatcctgctcggagcgagtcgggacggttcgc
ggattgcacttccagcagcctcctttcgcgcagaccaagctggttcgcgtgttaagggga
gcgatcgttgacgtggtggtcgaccttcggcggcggtcgccgacattcggccggcacgtc
tcggtcaaactggatagcgagactgacgagcagttgctcgttccaaaagggttcgctcac
ggtttctgtacgctcgagcctcaaactacggtcttttacaaggtcgacgaggtctactct
ccggaccacgacgccggcatccattgggccgatccggaattggctatcgagtggccggtg
agggcctcggcggcccagctttcaccgaaggatcgggcgcttccccgtttcgaccagctt
gcttcagtgtttgaatag
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