Bradyrhizobium ottawaense: CIT37_38475
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Entry
CIT37_38475 CDS
T05524
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT37_38475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bot03400
]
CIT37_38475
Enzymes [BR:
bot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CIT37_38475
DNA repair and recombination proteins [BR:
bot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIT37_38475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AWL97348
UniProt:
A0A2U8PI17
LinkDB
All DBs
Position
5864244..5865686
Genome browser
AA seq
480 aa
AA seq
DB search
MQYITLDTETHFDGWRKAARSLVLHHVQPTDVTWTVQGGEAELFAPQAPSPILEANEGTF
NVSGKFVELAQAAILHRDIQRFAILYRLLWRLKDNHDLIEVATDPDVAQVTAMARAVHRD
EHKMHAFVRFREIGRERAAHYVAWFEPEHHIVELAAPFFARRFADMPWSILTPDLCAHWD
GHALAFTPGVSKSEAPGEDRLEETWRRYYASIFNPARLKVKAMQAEMPKKYWRNLPEASI
IKPLIEDAERMTGAMIANAATDPHKPQKRPEAPMKRKPAADDLEALRAEAAHCRACHLYK
DATQTVFGEGPRSANIMLVGEQPGDKEDLAGHPFVGPAGQMLDRALEEAGVDRKKVYVTN
AVKHFKFVPRGKIRLHQKPNTPEIKACRQWFEREVSAIQPDLIVAMGATAAQSVFGKITP
IGKTRGRLIDLPDGRKALVTVHPSYLLRLPDPEAKVLEYQRFVDDLKIVAGLQKKAARAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacatcaccctcgacaccgaaacccatttcgacggctggcgcaaagccgcgcgc
agcctcgtgcttcatcacgtgcagcccaccgatgtcacctggaccgtgcagggcggcgag
gcggagttgttcgcgccgcaagcaccgtctccgatcctcgaggcgaacgaaggcaccttc
aacgtatcaggcaaattcgtcgagctagcccaggccgcaatcctgcaccgcgatatccag
cgctttgcgatcctctatcgcctgctctggcggctgaaggacaaccacgatctcatcgag
gtcgcgaccgaccctgacgtcgcgcaggtcacggcgatggctcgcgcggtccatcgcgac
gagcacaagatgcacgccttcgtccgcttccgcgagatcggacgcgagcgcgcagcacat
tacgtcgcctggttcgagccggagcatcacatcgtcgagctcgccgccccgttcttcgca
agacgctttgccgacatgccctggtcgatcctgacgccggacctctgcgcgcattgggat
ggccacgcgctcgcgttcacgccgggcgtcagcaagagcgaagcaccgggcgaagaccgg
ctggaggaaacctggcggcgctattacgccagcatcttcaatccggcccggctcaaggtg
aaggcgatgcaggccgagatgccgaagaaatattggaggaacctgcccgaggcctcgatc
attaagcccttgatcgaggacgccgaacgcatgaccggcgccatgatcgccaatgcggca
accgatccgcacaagcctcagaagcggccggaggctccgatgaaacgcaagccagctgcc
gacgatctcgaagcgctccgcgcggaggccgcgcattgccgggcctgccatctctacaag
gacgcgacccagaccgtgttcggcgagggcccgagatccgccaacatcatgctggtcggc
gagcagcccggcgacaaggaagacctcgccggccatccgttcgtcggtccggccggccag
atgctcgaccgtgcgctggaggaggccggtgtcgaccgcaagaaagtttatgtcaccaac
gcggtgaagcacttcaaattcgtgccgcgcggaaagatccgcctgcaccagaagccgaat
acgccggagatcaaagcgtgccggcaatggttcgaacgggaagtttcggcaatccagcct
gatctgatcgtggcgatgggcgccaccgccgcgcaaagcgtgttcggcaagatcactccg
atcggcaagacccgcggccggctcatcgaccttcccgacggacgcaaggctttggtgacg
gtgcacccgtcctatctgctgcggctgcccgatccggaagccaaggttctggaatatcag
cgctttgtcgacgatttgaagatcgtggccggcttgcagaagaaagccgcgcgggccgcc
taa
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