Heyndrickxia oleronia: I5818_10200
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Entry
I5818_10200 CDS
T07202
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bou
Heyndrickxia oleronia
Pathway
bou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I5818_10200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bou03019
]
I5818_10200
03400 DNA repair and recombination proteins [BR:
bou03400
]
I5818_10200
Enzymes [BR:
bou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I5818_10200
Messenger RNA biogenesis [BR:
bou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I5818_10200
DNA repair and recombination proteins [BR:
bou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I5818_10200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HEM4
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QQZ06738
LinkDB
All DBs
Position
2042588..2044045
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AA seq
485 aa
AA seq
DB search
MNLTDELYNHFGFSSFRTGQEDVISSVLNGKDTLALLPTGTGKSLCYQLPGYLMTGAVLI
VSPLLSLMQDQVDQFRMMGEKKVIALNSFLTFQERKKLLNTLHLYRFIYISPEMLTNEFV
LEKIKKLNITLFVVDEAHCISQWGHDFRPDYLNLHEVRALLGNPVTLALTATATEEVRED
IIKYLRLKRVNQLIFSVDRPNISLTVDKVRNHQMKVKKLLYLVKHLQKPGIIYFSSKRLA
EEIAQLLRNEGIGNIAAYHAGMEQEQRILIQQQFLNDQIQIICATSAFGMGVNKDNIRFV
IHFHMPYQLESYLQEIGRAGRDGEQSIAILLYASGDELIPLQMFDQELPTDSQIEQFYNL
SDERKKHVDLLNLSEIQHRFLIYYSKLSEEQSILINKVKKIRDSRIQYKQLKLKDMIKWL
KSTSCRRKDILEYFNETQTLQIHNCCDNCGIQMEEFEMEIVESINEEQQKTWQSMLGHLL
LRGEK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaactgatgaattatataatcattttggtttttcttcatttcgtacggggcag
gaggatgtcatttcttcggttttaaacggcaaggatacattggcattattgccaacaggt
accggaaaatctctttgttatcagttaccgggttatttaatgacaggtgctgttttaatc
gtctctccattattgtccttaatgcaggatcaagtagatcaatttcggatgatgggagaa
aaaaaggtaattgcattgaattcatttcttacatttcaagaacgaaaaaaattactaaat
acattacatttatatcgttttatttatatttcacccgaaatgctgacaaatgaatttgta
ttagaaaagattaagaaattgaatatcactctatttgtagtagatgaagcacattgtatt
tcacaatggggtcatgattttagaccagattatttaaatttacatgaggtacgagcatta
cttgggaatccggttacattagctttaactgctacagccacagaagaagtacgtgaagat
atcattaaatatttgcgattaaaaagagtaaatcaattaatattctctgtggatcgcccg
aatatttcattaactgtggataaagttaggaaccatcaaatgaaggttaaaaaactttta
tatttggttaaacatctacaaaagcctggcattatctatttttcaagtaagcgtctagca
gaagaaattgctcaattgcttcgcaatgagggcataggtaatatagcagcttatcatgcg
ggaatggagcaagagcaaagaatactgatacagcaacaatttttaaatgatcagatacag
ataatttgtgcaacaagtgcatttggaatgggggtaaataaggataatattcgctttgtc
attcattttcatatgccatatcaattagagtcttatttacaggagattggtcgtgcaggt
agagatggagaacagagcatagccattcttttatatgcttcaggggatgaattaatacca
ttacaaatgttcgatcaagaactgccaactgattctcaaatagaacagttttataatcta
tctgatgaaagaaaaaagcatgtggatcttttaaacttatctgaaatacagcatcgtttt
ttaatatattatagtaagttatcagaagaacagtctatattgattaacaaagtgaaaaaa
atccgagatagtaggattcaatataaacaattaaaactgaaagatatgataaaatggtta
aaatcaacctcatgccgtcgaaaagatatattagagtattttaatgaaacccaaaccctt
cagattcacaactgctgtgataattgtggcatccagatggaagagtttgaaatggaaata
gtagagtcaattaatgaggagcaacagaaaacttggcagtccatgctaggtcatttattg
ctgagaggcgaaaaataa
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