KEGG   Heyndrickxia oleronia: I5818_15285
Entry
I5818_15285       CDS       T07202                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bou  Heyndrickxia oleronia
Pathway
bou02024  Quorum sensing
bou03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bou00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    I5818_15285 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    I5818_15285 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bou03019]
    I5818_15285 (hfq)
   03036 Chromosome and associated proteins [BR:bou03036]
    I5818_15285 (hfq)
Messenger RNA biogenesis [BR:bou03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     I5818_15285 (hfq)
Chromosome and associated proteins [BR:bou03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    I5818_15285 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QQZ03123
LinkDB
Position
complement(3048568..3048795)
AA seq 75 aa
MKQAVNIQDQFLNQLRKDGTSVTVFLLNGFQLRGQIKGFDNFTVLFESEGKQQLVFKHAI
STFSPQKNVQINFEE
NT seq 228 nt   +upstreamnt  +downstreamnt
atgaaacaagcagtgaatattcaagaccaatttcttaatcaattaaggaaagatggaacg
tcagtaacggtatttcttttaaacggttttcagcttcgtggacaaatcaaaggttttgat
aattttaccgtgttattcgagtcagaaggaaaacaacagcttgtatttaaacatgcgatt
tcaaccttctcgccacaaaagaatgtgcaaatcaattttgaagaataa

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