Heyndrickxia oleronia: I5818_15420
Help
Entry
I5818_15420 CDS
T07202
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bou
Heyndrickxia oleronia
Pathway
bou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I5818_15420 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bou03019
]
I5818_15420 (rny)
Messenger RNA biogenesis [BR:
bou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I5818_15420 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Propep_M14
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QQZ07460
LinkDB
All DBs
Position
complement(3073064..3074626)
Genome browser
AA seq
520 aa
AA seq
DB search
MMELLSVIISILLGLVGVVVGYLLRKSIAEAKITGAKNAAEQILEDATRDAENLKKEALL
EAKDENHKLRTDIERELRERRNELQKQENRLLQKEENLDRKDESLDKREATLEKKEDSLN
FRQQHIEEMESKVDEMVQKQKSELERISSLTRDEAKAIIIQKVENELSHDLGMMIKESEN
RAKEEADKKAKNILSLAIQRCAAEHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALEKLVQDGRIHPARIEEMVDKARREVDEHIR
EIGEQTTFEVDVHGLHPDLIKILGRMKFRTSYGQNVLKHSIEVAHLSGLLAAELGEDARL
ARRAGLLHDIGKAVDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIISVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVDKSFAIQAGREVRIMVKPEQIN
DLEAHRLARDIRKRIEGELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ataatggaattattaagtgtaatcatctccattttgcttggcctcgtcggtgtagttgtt
ggctatcttttacgcaaatccatagctgaagcaaaaataacaggagcaaaaaatgcagca
gagcaaattttagaagatgcaactcgtgatgctgaaaacttgaaaaaagaagccctgtta
gaagcgaaggatgaaaatcataagcttcgtactgatattgaacgtgaacttcgtgaacga
agaaatgaattgcaaaaacaagaaaatcgattattgcaaaaggaggagaacctcgatcgt
aaggatgaatcacttgacaagcgtgaagcaacacttgaaaagaaagaggactctctaaat
ttcagacaacaacatattgaagagatggaaagcaaagtggatgagatggtacagaaacag
aagtctgaattagaacgtatctctagccttacccgcgatgaagcaaaagcaattattatt
caaaaagttgaaaatgagctttcacatgatttaggaatgatgattaaagaaagcgaaaat
cgtgcgaaagaagaagcggataaaaaggcgaaaaatatcctttctcttgccattcagcgt
tgtgctgcagaacatgttgctgaaacaacagtttctgtagtaaacttaccgaatgatgaa
atgaaagggcgaattatcggtcgtgaaggacggaatattcgaacattagaaacgttgact
ggaatcgaccttatcatagatgatacgccagaggcggtaatcctttcaggttttgatccg
attcgtagagaaacggctcgtattgcattagagaagctagttcaagacggacgcatccat
ccagcacgaattgaagaaatggtggataaagcaagaagagaagtagacgaacatattcgt
gaaattggtgaacaaactacctttgaagtggatgtacatggacttcatccagatttaatt
aagatattaggtcgaatgaaattccgtactagctatggtcaaaatgtccttaagcattca
attgaagttgctcatctctcagggcttctggcagccgagctaggagaagacgcaagatta
gctcgtcgtgcaggattgcttcatgatattggaaaagctgtcgatcatgaagtagaggga
agccatgtagaaattggtgttgaattagcgacgaaatataaggaacatcctgttgttatt
aacagtattgcttctcaccatggtgatactgagccaacatccattatttctgtattagtt
gcagcagcagacgcgttatcagctgctagacctggtgcacgaagtgaaacactagagaat
tatattcgaagacttgaaaagcttgaggaaatctcagaatcctatgaaggtgtagataaa
tcatttgcgattcaagctggtagagaagtaaggatcatggtgaaaccagaacaaattaat
gatcttgaagcacatcgcttagcgcgagatattcgtaagcgaatcgagggtgaactagat
tatccaggtcatataaaagtaacagtgatacgtgaaacaagggctgttgaatatgcaaaa
taa
DBGET
integrated database retrieval system
