Heyndrickxia oleronia: I5818_15860
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Entry
I5818_15860 CDS
T07202
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bou
Heyndrickxia oleronia
Brite
KEGG Orthology (KO) [BR:
bou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bou03032
]
I5818_15860 (topA)
03400 DNA repair and recombination proteins [BR:
bou03400
]
I5818_15860 (topA)
Enzymes [BR:
bou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I5818_15860 (topA)
DNA replication proteins [BR:
bou03032
]
Prokaryotic type
DNA Topoisomerases
I5818_15860 (topA)
DNA repair and recombination proteins [BR:
bou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I5818_15860 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QQZ03230
LinkDB
All DBs
Position
complement(3163104..3165179)
Genome browser
AA seq
691 aa
AA seq
DB search
MSEYLVIVESPAKAKTIERYLGKKYKVKASMGHIRDLPRSQMGVDTEHNFQPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLDLDIHSDCRVVFNEITKDAIKE
SFKHPRPINTDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREN
EIKNFKPEEYWTIVADFKKGKENFQGSFYGVDGKKLSLHSEAEVKNILSKISGKEFTVNS
VSKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRISEIAQAEAFSYIESQYGKEYTRSEQRKDKKASNAQDAHEAIRPTSTLREPSSLK
EYLSRDQLRLYKLIWERFVASQMSQAIMDTMSVDLLNGDVIFRANGSKLKFSGFMKVYVE
GTDDQTEEKENFLPQMEKGDQVTSEEIDPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFIPTELGEIVLELIMEFFPEILDVEFTAKMESNLDEIEEGK
IEWVKIIDEFYKGFHENLIKAEAEMEKVEIKDEEAGEDCENCGSPMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVTCPKCNEGNIIERKSKKKRIFYGCDRYPECDFLSWDKPIERKC
PKCDHLLVEKKLKKGVQVQCTNCDYKEKTVE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtacttggttatcgtggaatcgccagctaaggcgaaaacgattgaaagatat
ttaggaaaaaaatataaggttaaagcatctatgggccatattcgggatttacctagaagc
caaatgggtgtggatacagagcataattttcaaccgaaatatataacaattagaggaaaa
ggacctgtcttaaaagaattaaagacagctgctaaaaaagcgaagaaaatatatcttgca
gccgaccccgatcgtgaaggggaagcaattgcatggcatttagcacatagcttagatttg
gatattcactcagattgcagagttgtttttaatgaaataacgaaagatgcaattaaagaa
tcatttaaacaccctagaccaataaatacagatttagtagatgcccaacaggcaagaagg
atattggatcgtttagtcggttataatataagccctcttttatggaagaaagtaaaaaaa
ggtttaagtgcggggagggtacaatcagtcgccgtacgtttaattattgatcgtgagaat
gaaattaaaaactttaaacccgaagaatattggacgattgttgctgattttaaaaaagga
aaagaaaattttcagggttctttttatggagtggatggtaagaaattatcccttcattcc
gaggctgaggtgaaaaatattctttccaaaattagtgggaaagaatttaccgttaattct
gtatctaaaaaggaaagaaaacggaaccctgcacctcctttcactacatcatccttgcag
caggaagcagcacgtaaattaaattttagagcgaaaaaaacaatgatgctagcgcagcag
ttatacgaaggaattgatttaggaaaagaagggacagttggtttaattacctatatgaga
acggactcaacccgtatttcagaaattgcccaggcagaagcgttctcttatattgaaagc
caatatggaaaagaatatacccgctccgaacaacgtaaggataaaaaagcatcaaatgca
caagatgctcacgaagcaatccgtccaacaagtacattgcgggaaccaagctcattaaag
gaatatttaagtcgtgatcaattaaggttatataaattaatttgggaacgtttcgttgca
agtcaaatgtctcaggccataatggatacgatgagtgtcgatttattgaatggagatgtt
atttttagagcaaatggatctaaactaaaattttctggatttatgaaagtgtatgttgaa
gggacagatgaccaaacagaagaaaaagagaattttctccctcaaatggagaaaggagat
caagtcacttctgaggaaattgatcctaaacagcattttacacaaccacctccaagatat
acagaggcacgtttagtgaaaacattagaagaattgggcataggtcgcccttcaacctac
gcgccaactctagataccattcaaaaacgcggttacgttgccttggacaataaacgattt
attcctactgaattaggagaaattgtattagagctaatcatggaatttttcccggaaata
ttagatgtcgagttcactgcgaaaatggaaagtaatctcgatgagatagaagagggtaaa
attgaatgggttaagatcattgatgaattttacaaaggattccatgaaaatcttataaaa
gccgaagctgaaatggaaaaggttgagattaaggatgaggaagccggtgaggactgtgaa
aactgtggcagtccaatggtgttcaaaatggggcgttatggtaagtttatggcttgtagt
aattttcccgactgcagaaatacaaaaccaattgtaaaagagattggagttacatgtcct
aaatgtaatgagggaaatattattgaaagaaaaagtaaaaagaaaagaatattctacgga
tgcgatagatatccggagtgtgattttctatcttgggataaaccgattgaaagaaaatgt
cctaaatgtgatcatttattagtggagaaaaagttgaagaagggtgtacaggttcaatgt
accaattgtgattataaagaaaagacagttgaataa
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