Heyndrickxia oleronia: I5818_19485
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Entry
I5818_19485 CDS
T07202
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bou
Heyndrickxia oleronia
Pathway
bou03420
Nucleotide excision repair
bou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I5818_19485
03430 Mismatch repair
I5818_19485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bou03400
]
I5818_19485
Enzymes [BR:
bou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I5818_19485
DNA repair and recombination proteins [BR:
bou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I5818_19485
MMR (mismatch excision repair)
Other MMR factors
I5818_19485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_11
DUF3860
Motif
Other DBs
NCBI-ProteinID:
QQZ03892
LinkDB
All DBs
Position
complement(3908996..3910765)
Genome browser
AA seq
589 aa
AA seq
DB search
MQVKEEDYKLVESILLDNKAEFNSLQREFIELLETKTIIAGPGAGKTTALAAKIVILLKY
LNMTKSKDGLCIITHTNVAVNEINSALLKAGVGTISHPHFIGTIHEFFNRYCVIPYFKYK
YHHNNLLFDNEDTSDLGYYKTFVGIKIPWINQDKFKKFKDSFPERISKSELFLNEDNELN
LYNTTNWDKFESYRELMLNAKMSRKSKGFLTYDDTFLFSKIFLFENRFKEVLRKRFKYIF
LDEFQDTHPQGMNLLEDLFITPNNVFQKIGDPYQTITFNQPMPLVREENIFRINITNRFG
NEIAEHLNVIIPDSNIRSILEVKKSFTPIILLYKDKNDIYPTFKKIIQEHEEHDANFRGS
NKRDKVLVLERKWASDVKAGVLYKEKRQKRLISKNEALKTIIFDFIIKRIVYDGGTLSEV
KEWLKNHSQVHLLNKLLIKIIKKGGIDGTEIELKNLINVFLEERGSSKININNNLFKKLK
DITFEIQVDEHKEDEDDIFTIHSVKGETLRSVLLVDFEEKHLTNVLLHKYGTSQEENYEY
THQNLFYVAMSRVTHLFVFAMQESDCTSEIKKVLEKKWRIEEIKSTVEV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagttaaagaagaagactataaattagtagaaagcatattactagataataaagct
gaatttaatagtttacaaagagaatttattgaactattagaaactaaaacaattattgca
ggtccaggtgcaggtaagaccactgctttagccgcaaaaattgtaattttacttaaatat
ttgaatatgacaaaaagtaaagatggtttatgtattattacacatacaaatgtagcggtt
aatgaaataaatagtgcattacttaaagcgggagttgggacaattagccatccacacttt
attggaactattcatgaattttttaatcgctattgtgtaatcccttactttaaatataaa
tatcatcataataatttgttgtttgataatgaggatacaagcgatttggggtattataaa
acattcgttggaattaaaataccttggattaatcaggacaagtttaaaaaatttaaagat
agctttcctgaaagaattagtaaaagtgaattatttttaaatgaagataacgaattgaat
ttatataacactacaaattgggataaattcgaaagttatagagaattaatgcttaatgct
aaaatgtctagaaaatcaaagggatttctcacttatgacgatacctttttattttcaaag
attttcttatttgaaaatcgattcaaagaagtgttacgtaagaggtttaaatatatcttc
ttagatgaatttcaagatactcacccccaaggtatgaatttattagaagatttatttatt
acacctaataatgtttttcagaaaattggtgacccatatcagacaatcacatttaaccaa
ccaatgcctctagtaagagaagaaaatatttttagaataaatataacaaatcgttttgga
aatgaaattgcagaacacttaaatgtaattatacctgattcaaatattcgatcaattctt
gaagtaaaaaagtccttcacaccaattatcttgttatataaagataagaatgatatttat
cctacatttaagaaaattattcaagaacacgaggaacacgatgctaattttagaggaagt
aataaaagagataaggttctagtattagaacgaaaatgggcttcagatgttaaagctggg
gttttatataaggagaaaagacaaaaaaggttaatatcaaagaatgaagcactgaaaact
attatatttgactttattattaaaagaatagtttatgatggggggacactttcagaagtt
aaagaatggcttaaaaatcattcacaagtgcatttacttaacaaattgcttattaagatt
attaaaaaaggtggtatagatggaacggaaattgaattaaaaaatctgattaatgtattt
ttagaagaaagaggatcatcgaaaataaatattaataataatttatttaaaaaacttaaa
gatataacttttgaaatccaggtagatgaacataaagaagatgaggacgatatttttact
atacattcggttaaaggtgaaactcttcgttctgtcctattagtagattttgaagaaaag
catttgacaaatgtcttacttcataaatacggtactagtcaagaagaaaactatgagtat
acacatcaaaatttgttttatgttgctatgagtagggttacacatttatttgtttttgca
atgcaagaaagtgattgtacatccgaaattaaaaaagtgttagaaaagaaatggagaatt
gaagaaataaaatcaacggtggaagtttaa
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