Heyndrickxia oleronia: I5818_19820
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Entry
I5818_19820 CDS
T07202
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
bou
Heyndrickxia oleronia
Pathway
bou02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bou00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I5818_19820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bou03000
]
I5818_19820
Transcription factors [BR:
bou03000
]
Prokaryotic type
Helix-turn-helix
Other families
I5818_19820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
TPR_1
HTH_19
SUCH1_C
SPO22
TPR_8
ARM_TT21_C
Yippee-Mis18
PSMD12-CSN4_N
RapH_N
Motif
Other DBs
NCBI-ProteinID:
QQZ03931
LinkDB
All DBs
Position
3968182..3969444
Genome browser
AA seq
420 aa
AA seq
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MHIGTRIRFYRLLRGLSPEELSDGITALSYLASIENNGHTPPIEMLSQLCDRLEIPFMTY
PNEELTQLLDKWKPSLLQNDQEESSAIFEEISSKLSDSVDFQLILTYHVYLIRYYLIQKQ
LEKAKELIEMVKPFHFEMADDLKFSFQKFHGNYLYYTNQFAEAASLFNNAKNYLFAIDAN
LLDEKADLYYMYGLTLGRINKNTLSVFYIEEALSLFQQTYQMKRCTDCHMLLGVVYSKMQ
EYSDSEHHYTIAKQLAKSISYTDLIDKIEHNLGLLKSRQGKSKEAITHYLNSYEELDKQK
TNDQLQIIINIINEYYKIGFIHEVNIWLEHGFSLIESIDQQKEHYIELTFFQYIVRGYPE
GFEDFILNIAIPYFEERKQNQSIIVYSKKLGEYYQKKKRFKEAALSFAKANSVYEKILEL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatattgggacaagaattcgattttatcgtcttttaagaggacttagtcctgaggaa
ttatctgatggcattaccgcactatcatatctagcatctattgaaaataatggtcataca
cctcctattgaaatgctaagtcaattatgtgaccggcttgaaattccatttatgacctat
ccgaacgaagaattaactcagctcttggataaatggaagccttctttattacaaaatgat
caagaggaatcctctgccatttttgaggaaatttcaagcaaactttctgatagtgtggac
ttccaacttattctaacctatcatgtatacttaatcagatattacctaatacaaaaacag
cttgagaaggcaaaagaattaatcgaaatggttaaaccttttcactttgaaatggctgat
gacttaaaattctcatttcaaaaattccacggaaactatctctactacacaaatcaattc
gctgaggcagctagtctatttaataatgcaaaaaattacttatttgcgattgatgcaaat
ttacttgatgaaaaagccgacctatattatatgtatggactgactcttggtcgaatcaac
aaaaacacattatcggttttctacattgaagaagcattatcactttttcaacaaacctat
caaatgaagcgctgtacagattgtcatatgctacttggagtggtttatagtaaaatgcaa
gaatatagcgattctgaacatcattacacgattgccaaacagttagcaaaatctattagc
tatacagatttaatcgataaaattgaacataacttaggattgttaaaatctcgtcaaggg
aaatcaaaggaggcgattacacattatcttaatagttatgaagaattagataaacagaaa
acaaatgaccaactccaaattattattaatatcatcaatgaatactataagattggcttt
attcacgaggtaaatatttggctggaacatggtttttccctcatcgagtccattgatcaa
caaaaggagcactatattgaattaacctttttccagtatattgtaaggggctaccctgaa
ggcttcgaggattttatattgaatatagcgattccttatttcgaagaaagaaagcagaat
caatccattatcgtttattcaaaaaaactcggagaatattaccagaagaagaagagattt
aaggaggctgcgctctctttcgctaaggcaaattccgtctatgaaaaaattttagaactt
taa
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