Heyndrickxia oleronia: I5818_23580
Help
Entry
I5818_23580 CDS
T07202
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bou
Heyndrickxia oleronia
Brite
KEGG Orthology (KO) [BR:
bou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bou03009
]
I5818_23580 (rlmD)
Enzymes [BR:
bou01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
I5818_23580 (rlmD)
Ribosome biogenesis [BR:
bou03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I5818_23580 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
PrmA
MTS
Cons_hypoth95
Methyltransf_11
RrnaAD
Ubie_methyltran
N6_N4_Mtase
UPF0020
Methyltransf_32
AIG1
TRM
PCMT
Methyltransf_12
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QQZ04591
LinkDB
All DBs
Position
complement(4692002..4693378)
Genome browser
AA seq
458 aa
AA seq
DB search
MKIQLPVQKNDYIDVTFVDLTHDGHGVAKVDGYPIFVPNGLPGEKAKIKVIKVNKGYGFG
RIIELYETSPDRVKPDCPIYKECGGCQLQHLSYSGQLKAKQKQVKDVLQRIGKIENVTVH
PVLGMEDPWRYRNKAQVPVGDREGGLIAGFYQHRSHDIIDMEACLIQQEKNDTVIQTVKE
ICGKHGVRAYNEGTHKGTLRHIMARYGMKTGEVMIVLITRTTDLPNKKAIIDEITAQIPG
VKSIVQNINTQRTNVIFGVETKVLWGEEVIYDYIGNIKFAISARSFYQVNPEQTKVLYDQ
ALKYAGLTGQETVIDAYCGIGTISLFLTEKAKKVYGVEIVPEAIEDAKRNAELNGITNVE
FAVGEAERVIPKWYSEGITADVLVVDPPRKGCDETLLQTIIDMKPKKVVYVSCNPATLAR
DLRILEDGGYQTVEVQPVDMFPQTTHVECVVLMSRVEK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcagctacccgtccagaaaaatgactatatagatgtaacctttgtcgatctt
actcatgatggtcatggtgttgccaaagtagatggctatcccatctttgttcctaatgga
ttaccaggagaaaaagcaaagattaaagtaattaaggtcaataaaggatatggatttggc
cgtatcattgagttatatgaaacaagtccagaccgggtcaaaccagattgtccgatctat
aaggaatgtggaggatgccagctacagcatctgagctattcaggtcaactaaaggcaaaa
cagaaacaagtaaaagatgtactacaaagaattggtaaaattgaaaatgtaacagttcat
ccggtcctaggtatggaagatccatggcgttatcgcaataaagcacaggtgcctgtcggt
gacagagaaggcggactaattgccggattttatcagcatcgtagccacgatattatcgat
atggaagcttgtctcattcaacaagagaaaaacgacacagtcatccaaacggtaaaagaa
atctgtggaaaacatggagttcgtgcatacaacgaaggaacacataaaggcacattacgc
catattatggcccgctatggaatgaaaaccggagaagtcatgatcgtgctcatcacacgg
acaacagatctcccaaataaaaaagcgattatcgacgaaatcactgcgcaaatacctggt
gtaaaatctattgttcaaaacattaatacacagcgtacaaatgttatttttggagtagaa
acaaaagtactttggggagaagaagtcatctatgattatatcggcaacatcaaatttgcc
atctcagctcgctccttctaccaagtcaatccagaacaaacgaaggttctttatgatcaa
gccttaaaatacgcaggtctaaccggtcaagaaacagttatagatgcttattgtggaatc
ggaaccatctcattattcttaaccgaaaaggcgaagaaggtttatggagtagaaattgtt
ccagaagcgattgaagatgccaaacgtaatgcagaattaaatggaatcaccaatgttgaa
ttcgctgttggtgaagcggaaagagttattcctaaatggtattcagaaggcatcactgcc
gatgttcttgttgtcgatccaccgcgtaaaggctgtgacgaaacattactgcaaaccatt
attgatatgaagccaaagaaagtggtttatgtatcttgtaacccagctacattagcgaga
gatttaagaatattggaggatgggggatatcagacggttgaagtgcagccggtggatatg
ttcccgcagacgacgcatgtggagtgtgttgtcttgatgtcacgggtggagaaatag
DBGET
integrated database retrieval system
