Heyndrickxia oleronia: I5818_24175
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Entry
I5818_24175 CDS
T07202
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
bou
Heyndrickxia oleronia
Brite
KEGG Orthology (KO) [BR:
bou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bou03021
]
I5818_24175 (sigB)
Transcription machinery [BR:
bou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I5818_24175 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_28
IF2_N
Sigma70_ECF
DUF1492
HNF-1_N
HTH_3
GerE
HTH_37
TnsD
DUF134
KORA
DUF6761
NirdL-like_HTH
DUF5667
Motif
Other DBs
NCBI-ProteinID:
QQZ04685
LinkDB
All DBs
Position
complement(4819253..4820050)
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AA seq
265 aa
AA seq
DB search
MPKLSQPSQFGKEHINHLIKLFQENEDQNAQNDLVLHYEKLVDSIARKYSKGRSYHEDIF
QVGILGLLGAIRRYDESYGKSFESFAIPTIIGEIKRFLRDKTWSVHVPRRIKEIGPKIKV
TIEELTTELQRSPKIAEIAAKLNVSEEEILEAMEMGKSYQALSVDHSIEADSDGSTVTLL
DIVGNEDAGYEKVDQRLVLDKVLHVLNERERQIIQYTYLDNLSQKETGEKLGISQMHVSR
LQRKAIKKLKMAISGDSLMKESPSL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaattgtctcaacctagtcagtttggaaaagaacatataaatcatttaattaaa
ttatttcaagagaatgaagatcaaaacgcacagaatgatcttgtattacactatgaaaaa
ttagtggactccattgcacgaaaatattcaaaaggaaggtcttatcacgaggatattttt
caggttggaatattaggtttactaggtgcaattcgacgttatgatgaatcctatggaaaa
agctttgaatcatttgccatcccgacgattattggcgaaattaaacgattccttcgtgac
aaaacatggagtgttcatgttccacgacgtattaaagaaattggaccgaaaattaaggta
accattgaggaattaacaaccgaattacagcgatctccgaaaattgcagagattgctgct
aaattaaatgtatccgaggaagaaattttagaagcgatggagatggggaaaagctaccaa
gcattatcagttgaccactctatcgaagctgattcagatggaagtactgtcacattatta
gacattgtaggaaatgaagacgctggatacgagaaagtagatcaacgccttgttcttgat
aaggtattacatgttttaaatgaaagagagagacaaattattcaatacacttaccttgat
aatcttagtcaaaaggaaacaggagaaaaattaggcatttctcaaatgcatgtttcgcgt
ttgcagagaaaggcgataaaaaaattaaaaatggccataagtggtgactctttgatgaag
gagagtccatcattatga
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