Bosea sp. NBC_00550: NWE53_09080
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Entry
NWE53_09080 CDS
T09927
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bow
Bosea sp. NBC_00550
Brite
KEGG Orthology (KO) [BR:
bow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bow03016
]
NWE53_09080 (rnd)
Enzymes [BR:
bow01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NWE53_09080 (rnd)
Transfer RNA biogenesis [BR:
bow03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NWE53_09080 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UZF94314
UniProt:
A0AAT9T1N0
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All DBs
Position
1899784..1900923
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AA seq
379 aa
AA seq
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MHLISDTAELSAACDRLAAHPFVTVDTEFLRETTYYPKLCLIQLASPEEAVLVDPLAPDL
DLAPFFGLMVNDAVVKVFHAARQDLEIVWLLGRVLPVPLFDTQVAAMVCGYGDSVGYEQL
ANDLAKARIDKSSRFTDWSRRPLTEAQFSYAESDVTHLRDIYLALQADLDASGRESWVAE
EMAVLSSPGTYEVKPENAWLRLKGRVRKPRELPVLMELAAWREREAQTRDVPRQRVLKDD
ALMDIVQRGPRTTEGLAELRSVPNGFERSRNGAEVLAAIERAADIDPKTLPRLERERGRP
TNGAVLDLLKVLLKAVADAERVAPKIIATSDDLEAIASDELSDVPALKGWRREVFGEKAL
ALKNGSLSLRVQRGRVVVS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgatctccgacaccgctgaactctccgccgcctgcgatcgccttgccgcccat
cccttcgtgacggtcgacaccgagttcctgcgcgagacgacctattatccgaagctgtgc
ctgatccagctggcttcgccggaagaggcggttctggtcgacccgctggcgccggatctc
gatctcgcccccttcttcgggctgatggtcaacgacgccgtggtgaaggtcttccacgcc
gcccggcaggatctcgagatcgtctggctgctcggccgggtgctgcccgtcccgctattc
gacacgcaggtcgccgccatggtctgcggctatggcgactcggtcggctacgagcagctc
gccaacgacctcgccaaggcccgcatcgacaagtcctcgcgcttcaccgactggtcgcgg
cgcccgctgaccgaggctcagttttcctatgccgagtcggacgtcacccatctccgcgat
atctacctcgcgctgcaggccgatctcgatgccagcggccgcgagagctgggttgccgag
gaaatggcggtgctgagctcgcccgggacctacgaggtcaagccggagaatgcctggctt
cgcctgaagggccgcgtccgcaagccgcgcgagctgccggtcctgatggagctcgccgcc
tggcgcgagcgggaggcgcagacccgcgacgtgccgcgccagcgcgtgctgaaagacgac
gcgctgatggatatcgtccagcgcggcccgcgcaccacggaagggctggcggaattgcgc
tcggtccccaacggcttcgagcgctcgcgcaacggcgccgaggtccttgccgcgatcgaa
cgcgccgcggacatcgatccgaagaccctgcctcggctggagcgcgagcgcggccggccg
accaacggtgccgtgctcgacctgctcaaggtgctgctcaaggcggttgccgatgccgag
cgcgtcgcgccgaagatcatcgccaccagcgacgacctggaggccatcgcgtccgacgag
ctttcggacgtgcccgcgctcaagggctggcggcgggaagtcttcggcgagaaggcgctg
gcgctcaagaacggctcgctcagcctgcgcgtccagcgcggtcgtgtcgtggtgagctga
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