Bosea sp. NBC_00550: NWE53_10015
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Entry
NWE53_10015 CDS
T09927
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bow
Bosea sp. NBC_00550
Pathway
bow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NWE53_10015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bow03019
]
NWE53_10015
03009 Ribosome biogenesis [BR:
bow03009
]
NWE53_10015
Enzymes [BR:
bow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NWE53_10015
Messenger RNA biogenesis [BR:
bow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NWE53_10015
Ribosome biogenesis [BR:
bow03009
]
Prokaryotic type
rRNA helicases
NWE53_10015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UZF94478
UniProt:
A0AAT9T2K6
LinkDB
All DBs
Position
complement(2097768..2099789)
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AA seq
673 aa
AA seq
DB search
MSFSLTSPPLARALADRNYSEPTPVQSAVLEENARGRDLLVSSQTGSGKTIAYGLAIGET
LLGDAEKLGPAAEPLALIIAPTRELALQVQRELAWLYAQTGARVISCVGGMDPRREAMLL
DEGAHIVVGTPGRLRDHIERRRLDVSALKAVVLDEADEMLDLGFRDDLEYILKTTPEGRR
SLLFSATFPKAIVQLAQSYQRDALRIEVEATRRGHADISYKAVRVYPKEAELAVVNLLRF
HNAPVALVFCNTRNAVRHLEAILLERGFTSVALSGELGQNERNAALQALRDGRARVCVAT
DVAARGIDLPGLDLVIHAELPNDSEVMQHRSGRTGRAGNKGTSVLLVPQSRRRKAERLLM
EGKVEAEWIAPPTAEEIRVLDQERLLSDPLLSGDGSEDDAGMIEALMAGREARDIAAALV
RLYRTRLPAAEEVGDPGFGRDERRPVRTNEDYAAKRRPFGRDEGEEGERPRKPAGPRGDT
VWFRLDIGRKQGADPRQLLPMLCRRGRITRDEVGAIRIFDRETKVEIDADVADRFYESAK
VPDRDRITIEPTTEAERRPAKSFGDKAERPAAPRKSWDGAEATGDAPQRPRYQPKDGGER
EPRGEDRKPYRPEGRPQRDDARPRRDDGKPAGGGFKKPFAATGKPFAARPERTEGGRPAG
GGKPFGKGKPRRG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccctcacgagcccgccgctcgcgcgcgcgctcgccgatcgcaactattcc
gaaccgacgccggtgcagagcgctgtgctggaggagaacgcccgcgggcgcgatcttctg
gtttcctcgcagacaggctccggcaagaccatcgcctatggcctcgccatcggcgagacg
ctgctgggcgacgccgaaaagctcggccccgccgccgagccgctggcgctgatcatcgcg
ccgacgcgtgagcttgcgctccaggtgcagcgcgaactcgcctggctctacgcccagacc
ggggcgcgggtgatctcctgcgtcggcggcatggacccgcgccgcgaggcgatgctgctc
gacgagggcgcccatatcgtcgtcggcacgcccggccgcctgcgcgaccatatcgagcgg
cgccgcctcgatgtctccgcgctgaaggcggtcgtgctcgacgaggccgacgagatgctc
gatctcggcttccgcgacgatctcgaatacatcctgaagacgactcccgaggggcggcgc
agcctgctgttctcggcgaccttccctaaggccatcgtccagctcgcccagagctatcag
cgcgatgcgctgcgcatcgaggtggaagcgacgcggcgcggccatgccgacatctcctac
aaggccgtgcgcgtctatcccaaggaggcggaactcgcggtcgtcaacctgctgcgcttc
cacaatgcgccagtggcgctcgtcttctgcaacacccgcaacgccgtgcgccatctcgag
gcgatcctgctggagcgcggtttcacctccgtcgcgctctcgggcgaactcggccagaac
gaacgcaacgccgcgctgcaggcgctgcgcgacggccgggcgcgggtctgcgtcgcgacc
gatgtcgcggcgcgcggcatcgacctgccgggactcgacctcgtcatccatgccgaattg
ccgaacgattccgaggtgatgcaacaccgttcgggccgcaccggccgcgccggcaacaag
ggcacgagcgtgctgctggtgccgcagtcgcgccggcgcaaggccgagcgcctcctgatg
gagggcaaggtcgaggccgaatggatcgccccgccgacggcggaggaaatccgcgtgctc
gaccaggagcgcctgctatccgatccgctgctcagcggcgacggctccgaggacgatgcc
ggcatgatcgaggcgctgatggcgggccgcgaggcccgtgacatcgcggcggccctggtc
cgtctctaccgtacccggctgccagcggcggaagaggtcggcgatcccggcttcggccgt
gacgagcgccgcccggtccgcacgaacgaggattacgctgccaagcgccgtccgttcgga
cgcgacgagggcgaggagggcgaacgcccgcgcaagccggccggcccgcgcggcgacacc
gtctggttccggctcgacatcggccgcaagcagggcgccgatccgcgccagctcctgccg
atgctgtgccgccgcggccggatcacgcgcgacgaggtcggcgccatccgtatcttcgac
cgcgagaccaaggtcgagatcgatgccgacgtggccgaccgcttctacgaatcggcgaag
gtgccggatcgggaccggatcacgatcgagccgacgaccgaggccgagcggcggccggcc
aaatcttttggcgacaaggccgagcgcccggctgcgccgcgcaagagctgggacggtgcc
gaggcgacgggcgatgcgccgcagcgcccgcgctatcagcccaaggacggcggagagcgc
gagccgcgcggcgaggaccgcaagccctatcgcccggaaggcaggccccagcgcgacgac
gctcgcccgcgccgggatgatggcaagcccgccggtggcggcttcaagaagccgttcgct
gcgacgggaaagcccttcgccgccaggccggagcgtactgagggcgggcgccccgccggc
ggcggtaagccgttcggaaagggcaagccgcgccgcggctga
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