Allobosea sp. NBC_00550: NWE53_19095
Help
Entry
NWE53_19095 CDS
T09927
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bow
Allobosea sp. NBC_00550
Pathway
bow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NWE53_19095 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bow03019
]
NWE53_19095 (pnp)
03016 Transfer RNA biogenesis [BR:
bow03016
]
NWE53_19095 (pnp)
Enzymes [BR:
bow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NWE53_19095 (pnp)
Messenger RNA biogenesis [BR:
bow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NWE53_19095 (pnp)
Transfer RNA biogenesis [BR:
bow03016
]
Prokaryotic type
tRNA degradation factors
NWE53_19095 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
DUF7357
DUF8326
PHB_acc_N
Motif
Other DBs
NCBI-ProteinID:
UZF91219
LinkDB
All DBs
Position
complement(3963806..3965977)
Genome browser
AA seq
723 aa
AA seq
DB search
MFDIQTEELIWGGRKLVLETGKIARQADGAVLATYGETVVLATVVSAKEPKPGFDFFPLT
VNYQEKTFAAGRIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVEGYKNDTQVVVTVLQH
DLENDPDILAMVATSAALTLSGVPFMGPIGGARVGYIDGAYKLNPTVEEAKESVLDLVVA
GTQDAVLMVESEAKELPEDVMLGAVMFGHKHFQPVIDAIIRLAEKAAKEPRDYTPADNSV
VLDAVLKLVDADLRAAYKITTKAERYKALDAAKAKVASLISAEPDGKTTFTKEQVGGQFK
EAQAKVVRWTILDDGTRIDGRDLKTVRKIVAEAGMLPRTHGSALFTRGETQALVVTTLGT
GDDEQFIDSLEGTYKETFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPAK
AEFPYTIRVVSEITESNGSSSMATVCGTSLALMDAGVPLKAPVAGIAMGLILEGERFAVL
SDILGDEDHLGDMDFKVAGTAEGITSLQMDIKIAGITEEIMKVALDQAKGGRDHILGEMN
KALSASRSQLGEFAPRIETMKIPVDKIREVIGSGGKVIREIVEKTGAKVNIEDDGTIKIA
SADGKSIEAAIKWIKSIVSEAEPGVIYDGTVVKIMEFGAFVNFFGAKDGLVHISELAPQR
VQKVSDVVKEGDKVKVKFLGQDERGKIRLSMKVVDQETGEDLTEKLKAQRDAEKSREKQG
AAE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatccaaaccgaagaactgatctggggcggccgcaagctcgtcctcgaaacc
ggcaagatcgcccgtcaggccgacggcgccgtgctcgccacctatggcgagaccgtcgtg
ctcgccaccgtcgtctcggccaaggagccgaagccgggcttcgacttcttccccctgacg
gtgaactatcaggagaagaccttcgccgccggccgcatccccggcggctacttcaagcgc
gaggggcgcccgagcgagaaggagacgctggtctcccgcctgatcgaccgtccgatccgc
ccgctcttcgtcgaaggctacaagaacgacacgcaggtcgtcgtcaccgtgctccagcat
gatctggagaacgatcccgacattctggcgatggtcgccacctcggccgctctgacgctc
tccggcgtgcccttcatgggcccgatcggcggcgcgcgcgtcggctatatcgacggcgcc
tacaagctgaacccgacggtcgaggaggccaaggagtcggttctcgacctcgtcgtcgcc
ggcacgcaggacgcggtgctgatggtcgaatcggaggccaaggagcttcccgaggacgtg
atgctcggcgccgtgatgttcggccacaagcatttccagccggtgatcgatgcgatcatc
cgtctggccgagaaggccgccaaggagccgcgcgactacaccccggccgacaactcggtg
gttctggacgccgtcctcaagctcgtcgacgccgatctgcgcgccgcctacaagatcacc
accaaggccgagcgctacaaggcgctggacgccgccaaggccaaggtcgcctcgctgatc
tcggccgagcccgacggcaagaccaccttcaccaaggagcaggtcggcggccagttcaag
gaagcccaggccaaggtcgtgcgctggaccatcctcgacgacggcacccgcatcgacggc
cgcgacctcaagaccgtgcgcaagatcgtcgccgaagccggcatgctgccgcgcacccac
ggctcggccctgttcacccgcggcgagacgcaggcgctggtcgtgaccacgctcggcacc
ggcgacgacgagcagttcatcgactcgctggaaggcacctacaaggaaaccttcctgctg
cactacaacttccctccctactccgtcggcgagaccggccggatgggttcgcccggccgc
cgcgaaatcggccatggcaagctcgcctggcgcgccatccgcccgatgctgccggcgaag
gcggaattcccctacacgatccgcgtcgtctcggagatcaccgagtcgaacggctcctcc
tcgatggccaccgtctgcggcacctcgctggcgctgatggatgccggcgtgccgctgaag
gcgccggtcgcgggcatcgccatgggcctcatcctcgagggtgagcgcttcgccgtgctc
tccgacatcctcggcgacgaggaccatctcggcgacatggacttcaaggtcgccggtacc
gccgagggcatcacctcgctgcagatggacatcaagatcgccggcatcaccgaggagatc
atgaaggtcgccctcgaccaggccaagggcgggcgcgatcacatcctcggcgagatgaac
aaggcgctctcggcctcgcgcagccagctcggcgagttcgcgccgcgcatcgagacgatg
aagatcccggtcgacaagatccgcgaagtcatcggttcgggcggcaaggtgatccgcgag
atcgtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccatcaagatcgcc
tcggccgacggcaagtcgatcgaagccgcaatcaagtggatcaagtcgatcgtctcggaa
gccgagccgggcgtgatctatgacggcacggtcgtaaagatcatggagttcggcgccttc
gtgaacttcttcggcgccaaggacggcctcgtccacatctccgaactcgccccgcagcgc
gtccagaaggtctcggacgtcgtcaaggaaggcgacaaggtcaaggtcaagttcctcggc
caggacgagcgcggcaagatccgcctctcgatgaaggtcgtcgaccaggagaccggcgag
gacctgaccgagaagctcaaggcgcagcgcgacgccgagaagagccgcgagaagcagggc
gcggccgagtaa
DBGET
integrated database retrieval system
