Allobosea sp. NBC_00550: NWE53_24755
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Entry
NWE53_24755 CDS
T09927
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bow
Allobosea sp. NBC_00550
Pathway
bow02020
Two-component system
bow02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bow00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NWE53_24755 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NWE53_24755 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bow03021
]
NWE53_24755 (rpoN)
Transcription machinery [BR:
bow03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NWE53_24755 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Rv2175c_wHTH
PP_kinase_C
Motif
Other DBs
NCBI-ProteinID:
UZF92234
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All DBs
Position
5207166..5208689
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AA seq
507 aa
AA seq
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MAMMPRMELRQGQSLVMTPQLLQAIKLLQLSHLELQNFVDGELERNPLLERDDGAEPPSR
ADGPDNPHAADPESFARAESLHTQEGMEGRLGTGLDNVFQSEQPSVARSDSAGADSLPVI
GGAYGSRSGSFEDGPEGFESGLTAEISLHNHLSAQLDLAVIDPAQRIIGSHLIDAVDDSG
YLGEPIADIAERLGVGVERVEAVLRVVQSFDPSGIAARDVAECLTIQLRDRNRFDPAMQA
LIANLHLVAKRDFAALKRVCGVDDEDIADMVGEIRRLDPKPGRGFGGSAAETVVPDVFIR
SAPDGSWLIDLNPDTLPRLLVNQTYHARVSKAVRNDEEKAFIAECLQTANWLTRSLEQRA
RTILKVASEIVRQQDGFFAHGIEHLRPLNLKTVADAIGMHESTVSRVTSNKYLTCSRGVF
EMKYFFSAAIAATGYGEAHSAEAVRFRIKQMIDEESPSDVLSDDAIVTRLKAGGIDIARR
TVAKYRESLRIPSSMERRREKVAMALG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatgccgcgcatggagctacgtcagggccagtccctggtgatgacgccgcag
ctgctgcaggcgatcaagctcctgcagctgtcgcatctcgaactccagaacttcgtcgac
ggcgaactcgagcggaacccgctgctggaacgggacgacggggcggagccgccgtcgcgg
gccgatggtcccgacaacccgcatgccgccgaccctgagagcttcgctcgtgccgagagc
ctgcatacgcaggagggcatggaaggccggctcggcaccggcctcgacaatgttttccag
agtgagcagccgagcgttgcccgcagcgattccgccggcgccgacagcctgccggtcatc
ggcggcgcctatggttcgcgcagcggctccttcgaggatgggcctgagggcttcgagagc
gggctcacggcggaaatctcgctgcacaaccatctcagcgcgcagctcgacctcgcggtc
atcgacccggcgcagcggatcatcggcagccacctgatcgacgcggtcgacgacagcggg
tatctcggcgagcccatcgccgatatcgcagagcgcctcggtgtcggggtcgagcgggtg
gaagccgtgctgcgcgtggtccagagcttcgatccctcgggtatcgccgcgcgtgacgtc
gccgaatgcctcaccatccagctacgggatcgcaatcgcttcgatccggcgatgcaggcc
ctgatcgcgaatcttcacctcgtcgccaagcgcgatttcgccgccttgaagcgcgtctgc
ggcgtcgatgacgaggatatcgccgatatggtcggcgagatccgcaggctcgatcccaag
cccggtcgcggcttcggcggctcggcggcggagaccgtggtgccggatgtcttcatccgc
tccgcgcccgacggctcctggctgatcgatctcaaccccgacacgctgccgcgcctgctg
gtcaaccagacctatcacgcccgtgtctcgaaggcggtccgcaacgacgaggagaaggcc
ttcatcgccgagtgcctgcagacggcgaactggctgacccgctcgctggagcaacgcgcc
cgcaccatcctgaaggtcgcgagcgagatcgtgcgccagcaggacggcttcttcgcccat
ggcatcgagcatctgcgcccgctcaacctcaagaccgtcgccgatgccatcggcatgcat
gaatcgacggtctcgcgcgtcacctcgaacaagtacctgacctgctcgcgcggagtcttc
gagatgaaatatttcttctcggcggcgatcgcggcgacaggctatggcgaggcgcattcc
gcggaggccgtgcgtttccgtatcaagcagatgatcgacgaggagagcccgtccgacgtg
ctttcggacgacgccatcgtcacccggttgaaggccggcggaatcgacatcgcccggcgc
actgtggcgaaataccgcgaatccctgcgcatcccctcttcgatggagcggcggcgggag
aaggtcgcgatggcgctcggttag
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