KEGG   Allobosea sp. NBC_00550: NWE53_24755
Entry
NWE53_24755       CDS       T09927                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bow  Allobosea sp. NBC_00550
Pathway
bow02020  Two-component system
bow02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bow00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NWE53_24755 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NWE53_24755 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bow03021]
    NWE53_24755 (rpoN)
Transcription machinery [BR:bow03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NWE53_24755 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Rv2175c_wHTH PP_kinase_C
Other DBs
NCBI-ProteinID: UZF92234
LinkDB
Position
5207166..5208689
AA seq 507 aa
MAMMPRMELRQGQSLVMTPQLLQAIKLLQLSHLELQNFVDGELERNPLLERDDGAEPPSR
ADGPDNPHAADPESFARAESLHTQEGMEGRLGTGLDNVFQSEQPSVARSDSAGADSLPVI
GGAYGSRSGSFEDGPEGFESGLTAEISLHNHLSAQLDLAVIDPAQRIIGSHLIDAVDDSG
YLGEPIADIAERLGVGVERVEAVLRVVQSFDPSGIAARDVAECLTIQLRDRNRFDPAMQA
LIANLHLVAKRDFAALKRVCGVDDEDIADMVGEIRRLDPKPGRGFGGSAAETVVPDVFIR
SAPDGSWLIDLNPDTLPRLLVNQTYHARVSKAVRNDEEKAFIAECLQTANWLTRSLEQRA
RTILKVASEIVRQQDGFFAHGIEHLRPLNLKTVADAIGMHESTVSRVTSNKYLTCSRGVF
EMKYFFSAAIAATGYGEAHSAEAVRFRIKQMIDEESPSDVLSDDAIVTRLKAGGIDIARR
TVAKYRESLRIPSSMERRREKVAMALG
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggcgatgatgccgcgcatggagctacgtcagggccagtccctggtgatgacgccgcag
ctgctgcaggcgatcaagctcctgcagctgtcgcatctcgaactccagaacttcgtcgac
ggcgaactcgagcggaacccgctgctggaacgggacgacggggcggagccgccgtcgcgg
gccgatggtcccgacaacccgcatgccgccgaccctgagagcttcgctcgtgccgagagc
ctgcatacgcaggagggcatggaaggccggctcggcaccggcctcgacaatgttttccag
agtgagcagccgagcgttgcccgcagcgattccgccggcgccgacagcctgccggtcatc
ggcggcgcctatggttcgcgcagcggctccttcgaggatgggcctgagggcttcgagagc
gggctcacggcggaaatctcgctgcacaaccatctcagcgcgcagctcgacctcgcggtc
atcgacccggcgcagcggatcatcggcagccacctgatcgacgcggtcgacgacagcggg
tatctcggcgagcccatcgccgatatcgcagagcgcctcggtgtcggggtcgagcgggtg
gaagccgtgctgcgcgtggtccagagcttcgatccctcgggtatcgccgcgcgtgacgtc
gccgaatgcctcaccatccagctacgggatcgcaatcgcttcgatccggcgatgcaggcc
ctgatcgcgaatcttcacctcgtcgccaagcgcgatttcgccgccttgaagcgcgtctgc
ggcgtcgatgacgaggatatcgccgatatggtcggcgagatccgcaggctcgatcccaag
cccggtcgcggcttcggcggctcggcggcggagaccgtggtgccggatgtcttcatccgc
tccgcgcccgacggctcctggctgatcgatctcaaccccgacacgctgccgcgcctgctg
gtcaaccagacctatcacgcccgtgtctcgaaggcggtccgcaacgacgaggagaaggcc
ttcatcgccgagtgcctgcagacggcgaactggctgacccgctcgctggagcaacgcgcc
cgcaccatcctgaaggtcgcgagcgagatcgtgcgccagcaggacggcttcttcgcccat
ggcatcgagcatctgcgcccgctcaacctcaagaccgtcgccgatgccatcggcatgcat
gaatcgacggtctcgcgcgtcacctcgaacaagtacctgacctgctcgcgcggagtcttc
gagatgaaatatttcttctcggcggcgatcgcggcgacaggctatggcgaggcgcattcc
gcggaggccgtgcgtttccgtatcaagcagatgatcgacgaggagagcccgtccgacgtg
ctttcggacgacgccatcgtcacccggttgaaggccggcggaatcgacatcgcccggcgc
actgtggcgaaataccgcgaatccctgcgcatcccctcttcgatggagcggcggcgggag
aaggtcgcgatggcgctcggttag

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