Bosea sp. NBC_00550: NWE53_26775
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Entry
NWE53_26775 CDS
T09927
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bow
Bosea sp. NBC_00550
Pathway
bow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NWE53_26775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bow03019
]
NWE53_26775
Enzymes [BR:
bow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NWE53_26775
Messenger RNA biogenesis [BR:
bow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NWE53_26775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_25
AAA_19
AAA_22
NACHT
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UZF92606
UniProt:
A0AAT9SWJ8
LinkDB
All DBs
Position
5632371..5633816
Genome browser
AA seq
481 aa
AA seq
DB search
MTKFTDLGLAEPLLKALATEGYETPTPIQAQAIPHILKGRDLLGAAQTGTGKTAAFSLPM
LHRLLGKPRQMPQRAVRVLILSPTRELAAQIETSIRTYAQFTTVRSTVIFGGVPVGKQIR
ALGDKIDILVATPGRLLDLVDQRAVSLREIEFLVLDEADQMLDLGFIHALRRISTLIPKE
RQTLLFSATMPKPIREIASAYLTDPVEVAVTPVATTAEKIDQRVIFTEPNDKPALLAKTL
SVPEMERAIVFTRTKHGADKVVRQLDQAGIEAAAIHGNKSQGQRERALGAFRDGSLRILV
ATDIAARGIDVDGISHVVNYDLPNVPETYVHRIGRTARAGAAGVAIAFCTPEERGDFAAI
EKLTGIKPTPVGDVPYWDGRTPKKPQQNRGGRGQQQSRPQGQGRPQGQPGKRSEQGGHHH
AGGGARQERHERPRNPERAPRPEQAAQRKDGASAKEGLGGVAFLQQRTQQPRTNGARRRA
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaagttcactgatctcggcctcgccgagccgctgctcaaggcgctcgcgaccgag
ggttatgagacgcccacgccgatccaggcccaggcgatcccccacattctgaagggccgc
gacctgctcggcgccgcccagaccggcaccggcaagaccgctgccttctcgcttccgatg
ctgcaccggctgctcggcaagccgcgccagatgccgcagcgtgcggtgcgcgtgctgatc
ctgtcgccgacgcgtgagctcgccgcccagatcgagacctcgatccgcacctacgcgcag
ttcaccacggttcgttcgacggtgatcttcggcggcgttccggtcggcaagcagatccga
gccctcggcgacaagatcgacatcctcgtcgccacgcccggccgcctgctcgacctcgtc
gaccagcgcgccgtctcgctgcgcgagatcgagttcctcgtcctcgacgaggccgaccag
atgctcgacctcggcttcatccacgcgctgcgccgcatctccacgctgatcccgaaggag
cgccagacgctgctcttctcggcgaccatgccgaagccgatccgcgagatcgcctccgcc
tatctgaccgatccggtcgaggtcgccgtgaccccggttgcgaccaccgcggagaagatc
gaccagcgcgtcatcttcaccgagccgaacgacaagccggcgctgctggcgaagacgctg
agcgtgccggagatggagcgggcgatcgtcttcacccgcaccaagcacggtgcagacaag
gtcgtgcgccagctcgatcaggccggcatcgaggcggcggcgatccacggcaacaagagc
cagggccagcgcgagcgtgcgctcggcgccttccgcgacggtagcttgcgcattctcgtc
gcgaccgacatcgccgcccgcggcatcgatgtcgacggcatcagccatgtcgtgaactac
gacctgccgaacgtgccggagacctatgttcaccgcatcggccgtaccgcgcgcgccgga
gcggccggcgttgccatcgccttctgcacgccggaagagcgcggcgacttcgccgccatc
gagaagctgacgggcatcaagccgacgccggtcggcgatgtgccttactgggatggccgc
acgcccaagaagccgcagcagaatcgtggcgggcgcggtcagcagcagtctcgcccgcag
gggcagggccgtccgcagggtcagccgggcaagcgttccgaacagggcggccaccaccat
gccggtggcggcgcacgccaggagcgccatgaacggccgcgcaatcccgagcgcgccccg
cgtcccgagcaggcggcacagcgaaaagacggtgcttcggcaaaagaagggcttggcggc
gtcgcgttcttgcagcaaagaacacagcaaccacgcaccaacggcgcccggcggcgcgcg
cgctga
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