Brasilonema octagenarum: DP113_00860
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Entry
DP113_00860 CDS
T10103
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
box Brasilonema octagenarum
Pathway
box00300
Lysine biosynthesis
box00470
D-Amino acid metabolism
box01100
Metabolic pathways
box01110
Biosynthesis of secondary metabolites
box01120
Microbial metabolism in diverse environments
box01230
Biosynthesis of amino acids
Module
box_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
box00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DP113_00860 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DP113_00860 (lysA)
Enzymes [BR:
box01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DP113_00860 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QDL13019
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All DBs
Position
complement(210593..211999)
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AA seq
468 aa
AA seq
DB search
MVSTHPAGVQYSGSQYLPQANPQNISLSPNQQLLPLTARVNNHDHLEIGGCDVTTLVEQF
GSPLYILDEQTLRTACRQYQDSFKRYYKGESQVLYASKAWSCISVCAIAHDAGLGIDVVS
GGELYTALSAGVNPDKIYFHGNNKSHQELTFAIESGCIIVVDNWYELRTLVDIAKQTATQ
RSIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNQLDDLFTFVSQQSVINCLGLHAHIG
SQIFERQPHQDLAAVMVQWLNKAAGYGLSIKELNVGGGLGIKYTESDDPPSIEEWVKPIC
EVIQQACAANNLPLPKLLSEPGRSLIGTACVTAYSIGSSKVIPEIRTYVAVDGGMSDNPR
PITYQSVYRAVVANRMSAPITESVTIAGKHCESGDILIKDARVPKIESGDILVVIATGAY
NYSMASNYNRLPRPAAVIVANGEANLILRRETYQDLIRQDCLPQRLKS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgacacaccctgctggggttcaatattctggtagtcagtatttaccacaagca
aaccctcaaaacatcagtctttcaccaaatcagcaacttttgccgttaacagccagagtt
aacaatcatgatcatctcgaaattggcggttgtgacgtcacaacgttagttgaacaattt
ggatcaccgctctatattttagatgagcaaaccctgcgaacagcttgtcgtcaatatcaa
gacagcttcaaacgttattacaagggggaatctcaggtactgtacgcttccaaagcgtgg
agttgtatttctgtttgtgcgatcgcacacgatgctggtttaggaatagatgtcgtctct
gggggtgaactctatacagccctgagtgcgggtgtcaatcccgataaaatctatttccac
ggcaataataaatcccaccaagaactaacttttgccattgagtctggctgcatcattgta
gtagataactggtatgagttacgtactttggtggatatagctaaacaaacagcaacacaa
cgttctatccgcatcatgttgcgtttaacgccaggtatcgaatgtcacacccacgagtat
attcgcacgggacatttagatagcaaatttggctttgatcccaatcaactagatgatttg
tttacttttgtcagtcaacaatctgtgattaactgtctgggattacatgctcacataggt
tcccaaatttttgaacgtcaacctcatcaagatttagctgcggtgatggtgcagtggcta
aataaagctgctggatatggtttatcgatcaaagagttgaatgtgggaggcggcttaggg
attaagtatacagaatcggatgatccacctagcatagaagagtgggtgaaaccgatttgt
gaagttattcaacaagcttgtgctgcaaacaatttgcctttgcccaaattattatctgaa
ccagggcgttcactgattggaacagcttgtgtgacagcatactctattggttcatccaag
gtaattccagaaatacgtacctatgtagcagttgatggaggaatgtctgacaatccgcgg
ccaatcacataccagtctgtgtatcgcgcagtcgttgctaaccgaatgtctgctccaata
acagaaagtgtaacaatagctggcaaacattgtgaatctggggatattctaataaaagat
gcccgagtgccaaaaattgaatctggggatattcttgtagttattgcgactggtgcttac
aattacagtatggcatctaactacaatcgtctgccccgaccggcagctgttatagtagcg
aatggcgaagcaaacttgattttgcgacgcgaaacttatcaggacttaattcgacaggac
tgcctaccgcaaagacttaaaagctag
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