Brasilonema octagenarum: DP113_01925
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Entry
DP113_01925 CDS
T10103
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
box Brasilonema octagenarum
Brite
KEGG Orthology (KO) [BR:
box00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
box03009
]
DP113_01925 (rimO)
Enzymes [BR:
box01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DP113_01925 (rimO)
Ribosome biogenesis [BR:
box03009
]
Prokaryotic type
ribosomal protein modification factors
DP113_01925 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
Thioredoxin_6
CLP1_P
DUF7159
Motif
Other DBs
NCBI-ProteinID:
QDL13197
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Position
466521..467840
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AA seq
439 aa
AA seq
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MGDKPTIAISHLGCEKNRVDTEHMLGLLVEAGYGVDSNEELAEYVIVNTCSFIEAAREES
VRTLVELAEADKKIVITGCMAQHFQEQLLEELPEAVAVVGSGDYHKIVDVIQQVEQGKRV
KLVSSQPTYIADETTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVT
EAEQLASQGVQEIILISQITTNYGIDIYGKPKLAELLRALGKVNVPWIRIHYAYPTGLTP
DVITAIGETSNVLPYLDLPLQHSHPDILRAMNRPWQGRVNDGIIERIKETLPKAVLRTTL
IVGFPGETQEHFEHLSQFIQRHEFDHVGVFTFSKEEGTPAYNLPNQLPQFVMDERRNVIM
ELQQPISLKKNQLEIGKVVDVLIEQENPVTGQLVGRSGRFSPEVDGQVFVYGEARLGTIV
PVAIQKADAYDLYGQVVTN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaagccaacaattgcaatttctcacttagggtgtgagaaaaatagagtagat
acagaacatatgctcggactcctagtagaagcagggtacggcgtagattctaatgaagag
ttagcagaatatgttatagttaatacatgtagttttattgaagcggcaagagaagaatct
gttagaactttagtagaactggcagaagcagataaaaaaattgttatcacaggctgtatg
gcgcagcacttccaagaacagttgttggaagagttgcctgaggcagtagcagtggtggga
agcggggattatcacaaaatagtggatgttattcagcaagtagaacaaggtaagcgggtt
aagctcgttagttcacagccaacctacattgctgatgagaccacaccccggtaccgcacc
acaacagaaggagtcgcttacctacgagttgccgaaggttgtgattaccgatgtgctttt
tgcataattcctcatctgcgggggaaccagcgatcgcgtaccatagaatcaatagttacc
gaagcagaacagctagcaagtcaaggtgtccaagaaatcattttgatttcccaaattacg
accaattacggtatcgatatttatggtaagccgaaattagctgaattacttcgtgctttg
gggaaagtcaatgttccttggattcgtatacactatgcctatccaaccggactcacccca
gatgtgataacagcaattggtgagacatctaacgtcttaccttacctggatttgcccttg
cagcattcccatccagacattctccgcgctatgaatcgtccctggcaaggacgggtgaac
gatgggattatcgaacgcataaaagagacattaccaaaagctgtgctgcgaacgacgttg
attgtcggttttccaggagaaacacaggaacattttgagcatctgtcgcagttcatccag
cgtcatgagtttgaccatgtgggtgtgtttaccttttcaaaagaagaaggaacacctgcc
tacaacctaccaaatcagctgcctcaattcgtcatggatgagcggcggaacgtaatcatg
gaactccaacagccgatttctttaaagaaaaatcaacttgaaattggcaaagtcgttgat
gttctgattgaacaagaaaatcctgtcacaggacaattagttggtcgttctggcaggttt
tccccagaagtagatgggcaggtatttgtttatggagaagcacgcttaggaaccatcgta
ccagtagctatccaaaaagctgatgcttacgacctttatggtcaagttgtcaccaactaa
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