Brasilonema octagenarum: DP113_02930
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Entry
DP113_02930 CDS
T10103
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
box Brasilonema octagenarum
Pathway
box03420
Nucleotide excision repair
box03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
box00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DP113_02930
03430 Mismatch repair
DP113_02930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
box03400
]
DP113_02930
Enzymes [BR:
box01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DP113_02930
DNA repair and recombination proteins [BR:
box03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DP113_02930
MMR (mismatch excision repair)
Other MMR factors
DP113_02930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QDL13374
LinkDB
All DBs
Position
704513..706897
Genome browser
AA seq
794 aa
AA seq
DB search
MPKESQSIESTLPVPSPQETGIANIRNTLRQGQQRMADWNSGSLAVSAVPGAGKSTGMAA
AAAIAIAHQYEQSAQSRRNIRRQLIVVTFTRSAAANIKIKIREYLKELSLPQTGFSVNTL
HGLALNIASRYPNLSGLELDNVTLITPNQSHRFIRTAVEQWIATAPGRYSRLLEGIQFDG
EETERLRRQSVLRTEVLPELATIVIHEAKSSGLLPEDLREFGKKTTGKQGTDEYNILSIA
AGLYEQYQNLMRSRDFIDYDDMILAALRVLENDNARKIEQNKVFAVFEDEAQDSSPLQTK
LLTILAKDADNLDEPPNMIRVGDPNQAINSSFTPADPIYFRQFCKDCDAQQRLVTMDQAG
RSTKIIIDAANFVLEWVNSLYVKTTQQEDNNRETQINKEFSQTPPTPFRFQRIRPVEPNH
READVNPQAVGLGLELYTPRDIHHTVELLSQRIVELFSQEPDNISAAILVREHRQGRWLA
QALSSVCKEHNIPVYDVGERDRHSHVPEEVLALLQFCDRPHSPDYLKRTLEVLLQRRLIE
TQDFNALATLPEEFLYPTPLASPQPQPVQKAAHLCRSLLRARLELPLYQLISFIALTLKY
EQAELATADKLAERVIQQIAGNTSMGSMLNVLSEIVSSERFEPVETEDLEKRYTRNGQLT
IITMHKAKGLDWDYVFMPFLHENLIPGRFWVPPQSQFLGNFTLSEVARAQIRAALHGQST
LPSITTAWEQAKHLKTAEEYRLLYVAMTRAKRLLWMSAAKKAPFTWSKPENLQEQTPCPV
FPALKRQFPKSVRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaaagaatctcaatctatagaatctacattacctgtaccttccccacaagagaca
ggcatagcaaatatccgtaataccctgcgccaaggacagcagcgtatggctgactggaac
tccggttcactagctgtgtcagcagttcctggtgctggcaaatctaccggaatggctgca
gcagctgcaattgcgatcgcccatcagtatgaacaatctgcccaatcacgtcgaaacatc
cgtcgtcaactgattgttgttacttttactcgctcagctgctgctaatattaaaatcaaa
atccgcgaatacttaaaagaattatcactaccccaaactggctttagtgtcaatacatta
catggtctggcgttgaacatagctagccgttatcctaatttatcaggtttagaattagat
aacgtcactttaattacaccaaatcaaagtcatagatttattaggactgctgtagagcaa
tggattgccaccgctccggggcgctattctcggttattagaaggtattcaatttgacggc
gaagaaacagaaagactgcggcgacagtcggtattgcggacagaagtcttgccagaacta
gcaactatagttattcatgaagcaaagagttctggtttattaccagaagatttgcgtgaa
tttggcaaaaaaaccactggcaaacaaggcacagacgaatataacatcttaagtattgct
gctgggttgtacgagcaatatcagaatttgatgcgatcgcgtgacttcattgactacgac
gacatgattttagccgccctgcgtgttttggaaaacgacaacgcccgtaaaatcgagcaa
aataaagttttcgccgtctttgaagacgaagcccaagattcgagtcccttgcaaacaaag
ctattaacaattctcgccaaagacgccgataatcttgacgaaccaccaaatatgattcgc
gttggtgatccaaaccaagcgattaactcaagctttaccccagccgatccgatttatttt
cggcaattctgcaaagattgcgacgcccagcaacgattagtaacaatggatcaagctggt
cgtagcacgaaaattatcatcgacgccgccaactttgtcttagagtgggtaaatagtctt
tacgtgaaaaccacacaacaagaggataataacagggaaacacagatcaacaaagaattt
tcccagactcctcccactccttttcgtttccaaagaattcgccccgttgaacctaatcac
cgtgaagctgatgtcaatccccaagctgtgggactaggattggaactgtacacaccacgt
gacattcatcacaccgtcgagttgctgtcccagaggattgtagagttattttctcaagaa
cccgacaatattagtgcagcgattttagtacgggaacatcgtcagggacggtggttggca
caagcgctgagttctgtgtgtaaagagcataacattcctgtgtatgatgtgggggagcgc
gatcgccattctcatgtaccagaagaagttttagcacttttacaattttgcgatcgcccc
cactctcccgactacctcaaaagaacattagaagttcttctacaacggcgtttgattgaa
acccaggatttcaacgcccttgcaactttaccagaagaatttttgtatcctactccttta
gcttcacctcaaccacaaccagtccaaaaagctgctcatctttgtcgaagtttacttcgt
gctcgtttagaactacctttgtaccagttaatttcattcatcgccctaacattaaaatat
gagcaagcagaactcgcaacagccgacaaactcgcagaaagagtcatccagcaaatagct
ggtaatacttcgatgggttcaatgctgaatgtattaagtgaaatcgtcagttccgaacgc
tttgaaccagtagaaacagaagacttagaaaaacgatacacccgtaacggtcaactgaca
atcatcaccatgcacaaagcaaaagggctagattgggactacgttttcatgccttttctc
catgaaaacttaattcctggtagattttgggttcctcctcaaagccagtttctgggtaac
tttactttatcagaagttgctcgcgcccaaattcgcgctgctctacacggtcaatctacc
ttacccagcatcaccacagcttgggaacaagcaaaacacctcaaaacagctgaagaatac
cgcttactctatgttgctatgacacgagcaaagcgtctgttatggatgtctgctgcaaaa
aaagctcctttcacctggagtaaaccagaaaacttacaagaacaaaccccttgtccggta
tttccagcactaaagcggcagtttcccaaaagtgtacgaaactag
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